Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TOP1P11387 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.47■□□□□ 0.87
TOP1P11387 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.47■□□□□ 0.87
TOP1P11387 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.47■□□□□ 0.87
TOP1P11387 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.47■□□□□ 0.87
TOP1P11387 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TOP1P11387 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC20.47■□□□□ 0.87
TOP1P11387 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
TOP1P11387 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
TOP1P11387 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
TOP1P11387 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC20.47■□□□□ 0.87
TOP1P11387 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
TOP1P11387 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TOP1P11387 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
TOP1P11387 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TOP1P11387 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TOP1P11387 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TOP1P11387 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.46■□□□□ 0.87
TOP1P11387 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.46■□□□□ 0.87
TOP1P11387 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.46■□□□□ 0.87
TOP1P11387 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TOP1P11387 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TOP1P11387 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TOP1P11387 LAGE3P1-201ENST00000425356 484 ntBASIC20.46■□□□□ 0.87
TOP1P11387 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC20.46■□□□□ 0.87
TOP1P11387 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
TOP1P11387 BX640515.1-201ENST00000617215 977 ntBASIC20.46■□□□□ 0.87
TOP1P11387 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.46■□□□□ 0.87
TOP1P11387 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC20.46■□□□□ 0.87
TOP1P11387 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TOP1P11387 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TOP1P11387 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TOP1P11387 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TOP1P11387 AC243591.1-201ENST00000452967 1364 ntBASIC20.46■□□□□ 0.87
TOP1P11387 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.45■□□□□ 0.86
TOP1P11387 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
TOP1P11387 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
TOP1P11387 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC20.45■□□□□ 0.86
TOP1P11387 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.45■□□□□ 0.86
TOP1P11387 AL590627.1-203ENST00000421194 1026 ntBASIC20.45■□□□□ 0.86
TOP1P11387 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC20.45■□□□□ 0.86
TOP1P11387 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC20.45■□□□□ 0.86
TOP1P11387 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.45■□□□□ 0.86
TOP1P11387 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TOP1P11387 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.45■□□□□ 0.86
TOP1P11387 AC139887.3-201ENST00000568585 713 ntBASIC20.45■□□□□ 0.86
TOP1P11387 LITAF-211ENST00000572255 516 ntTSL 4 BASIC20.45■□□□□ 0.86
TOP1P11387 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC20.45■□□□□ 0.86
TOP1P11387 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC20.45■□□□□ 0.86
TOP1P11387 AC008735.5-201ENST00000623544 497 ntBASIC20.45■□□□□ 0.86
TOP1P11387 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TOP1P11387 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 LINC00304-203ENST00000565008 1864 ntBASIC20.45■□□□□ 0.86
TOP1P11387 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TOP1P11387 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TOP1P11387 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.44■□□□□ 0.86
TOP1P11387 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.44■□□□□ 0.86
TOP1P11387 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC20.44■□□□□ 0.86
TOP1P11387 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TOP1P11387 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TOP1P11387 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TOP1P11387 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TOP1P11387 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TOP1P11387 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.44■□□□□ 0.86
TOP1P11387 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC20.44■□□□□ 0.86
TOP1P11387 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC20.44■□□□□ 0.86
TOP1P11387 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.44■□□□□ 0.86
TOP1P11387 AC012640.2-201ENST00000561606 901 ntBASIC20.44■□□□□ 0.86
TOP1P11387 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC20.44■□□□□ 0.86
TOP1P11387 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC20.44■□□□□ 0.86
TOP1P11387 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TOP1P11387 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC20.44■□□□□ 0.86
TOP1P11387 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.44■□□□□ 0.86
TOP1P11387 HLA-J-201ENST00000462773 1622 ntBASIC20.44■□□□□ 0.86
TOP1P11387 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TOP1P11387 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
TOP1P11387 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TOP1P11387 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TOP1P11387 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TOP1P11387 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
TOP1P11387 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TOP1P11387 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TOP1P11387 AMT-250ENST00000637682 1823 ntTSL 5 BASIC20.43■□□□□ 0.86
TOP1P11387 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms