Protein–RNA interactions for Protein: P0DL12

SMIM17, Small integral membrane protein 17, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM17P0DL12 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC13.03□□□□□ -0.32
SMIM17P0DL12 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM17P0DL12 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM17P0DL12 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM17P0DL12 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM17P0DL12 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM17P0DL12 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM17P0DL12 OR2I1P-209ENST00000641730 5365 ntBASIC13.03□□□□□ -0.32
SMIM17P0DL12 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.03□□□□□ -0.32
SMIM17P0DL12 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM17P0DL12 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
SMIM17P0DL12 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM17P0DL12 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.03□□□□□ -0.32
SMIM17P0DL12 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM17P0DL12 RCC2-202ENST00000375436 4087 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
SMIM17P0DL12 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC13.03□□□□□ -0.32
SMIM17P0DL12 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM17P0DL12 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM17P0DL12 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM17P0DL12 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM17P0DL12 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM17P0DL12 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC13.02□□□□□ -0.32
SMIM17P0DL12 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.02□□□□□ -0.32
SMIM17P0DL12 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.32
SMIM17P0DL12 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
SMIM17P0DL12 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
SMIM17P0DL12 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC13.02□□□□□ -0.32
SMIM17P0DL12 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM17P0DL12 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.32
SMIM17P0DL12 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM17P0DL12 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM17P0DL12 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM17P0DL12 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC13.02□□□□□ -0.33
SMIM17P0DL12 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM17P0DL12 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.02□□□□□ -0.33
SMIM17P0DL12 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC13.02□□□□□ -0.33
SMIM17P0DL12 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC13.02□□□□□ -0.33
SMIM17P0DL12 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM17P0DL12 AC128676.1-201ENST00000454392 318 ntBASIC13.02□□□□□ -0.33
SMIM17P0DL12 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM17P0DL12 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM17P0DL12 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.02□□□□□ -0.33
SMIM17P0DL12 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.02□□□□□ -0.33
SMIM17P0DL12 MIR3180-4-201ENST00000582223 153 ntBASIC13.02□□□□□ -0.33
SMIM17P0DL12 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM17P0DL12 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM17P0DL12 DECR2-212ENST00000627716 352 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM17P0DL12 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM17P0DL12 SRI-203ENST00000419179 1307 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM17P0DL12 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM17P0DL12 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM17P0DL12 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
SMIM17P0DL12 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM17P0DL12 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC13.02□□□□□ -0.33
SMIM17P0DL12 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SMIM17P0DL12 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM17P0DL12 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
SMIM17P0DL12 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM17P0DL12 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM17P0DL12 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
SMIM17P0DL12 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM17P0DL12 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM17P0DL12 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.01□□□□□ -0.33
SMIM17P0DL12 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SMIM17P0DL12 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 SAPCD2P4-201ENST00000424595 1171 ntBASIC13.01□□□□□ -0.33
SMIM17P0DL12 GRAMD4P1-201ENST00000435181 1110 ntBASIC13.01□□□□□ -0.33
SMIM17P0DL12 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC13.01□□□□□ -0.33
SMIM17P0DL12 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM17P0DL12 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM17P0DL12 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC13.01□□□□□ -0.33
SMIM17P0DL12 AP001412.1-201ENST00000608405 714 ntBASIC13.01□□□□□ -0.33
SMIM17P0DL12 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC13.01□□□□□ -0.33
SMIM17P0DL12 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC13.01□□□□□ -0.33
SMIM17P0DL12 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM17P0DL12 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SMIM17P0DL12 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SMIM17P0DL12 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
SMIM17P0DL12 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
SMIM17P0DL12 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.01□□□□□ -0.33
SMIM17P0DL12 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms