Protein–RNA interactions for Protein: P0C0E4

RAB40AL, Ras-related protein Rab-40A-like, humanhuman

Predictions only

Length 278 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40ALP0C0E4 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 YBX2P1-201ENST00000394192 760 ntBASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 ELK2BP-201ENST00000415014 1224 ntBASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 AC002347.1-201ENST00000569543 541 ntBASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 AC006504.4-201ENST00000592118 1568 ntBASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.42■□□□□ 0.22
RAB40ALP0C0E4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 RPSAP43-201ENST00000402237 625 ntBASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 HNRNPA1P28-201ENST00000424481 961 ntBASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 IGHV3-65-201ENST00000523210 341 ntBASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 AC008667.4-201ENST00000607370 168 ntBASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 AC009336.1-201ENST00000608941 1553 ntBASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RAB40ALP0C0E4 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 KRT18P55-202ENST00000578578 1546 ntBASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 CRYGEP-201ENST00000412192 528 ntBASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 GPX1P2-201ENST00000429271 606 ntBASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 PRSS29P-201ENST00000440800 595 ntBASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 RPS15P9-201ENST00000494093 319 ntBASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 MNT-208ENST00000575394 606 ntTSL 4 BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 MTDHP5-201ENST00000598980 586 ntBASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 AC008764.6-201ENST00000595909 2069 ntBASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RAB40ALP0C0E4 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RAB40ALP0C0E4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms