Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
HOXC6P09630 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC6P09630 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC6P09630 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXC6P09630 AC140658.5-201ENST00000438532 169 ntBASIC19.55■□□□□ 0.72
HOXC6P09630 AC087163.2-201ENST00000457299 853 ntBASIC19.55■□□□□ 0.72
HOXC6P09630 AC067863.1-201ENST00000494933 530 ntBASIC19.55■□□□□ 0.72
HOXC6P09630 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.55■□□□□ 0.72
HOXC6P09630 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC19.55■□□□□ 0.72
HOXC6P09630 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC19.55■□□□□ 0.72
HOXC6P09630 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC6P09630 AL390955.2-201ENST00000603032 514 ntBASIC19.55■□□□□ 0.72
HOXC6P09630 AC239800.4-201ENST00000603712 296 ntBASIC19.55■□□□□ 0.72
HOXC6P09630 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC6P09630 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC6P09630 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC6P09630 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC6P09630 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC19.55■□□□□ 0.72
HOXC6P09630 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.55■□□□□ 0.72
HOXC6P09630 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
HOXC6P09630 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXC6P09630 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC6P09630 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXC6P09630 AP000997.3-201ENST00000623333 2250 ntBASIC19.54■□□□□ 0.72
HOXC6P09630 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC6P09630 AC046185.3-201ENST00000623228 1824 ntBASIC19.54■□□□□ 0.72
HOXC6P09630 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
HOXC6P09630 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC6P09630 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXC6P09630 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXC6P09630 TIMM8BP1-201ENST00000452384 211 ntBASIC19.54■□□□□ 0.72
HOXC6P09630 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC19.54■□□□□ 0.72
HOXC6P09630 PRR29-209ENST00000582540 967 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXC6P09630 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.54■□□□□ 0.72
HOXC6P09630 AL645728.2-201ENST00000641974 660 ntBASIC19.54■□□□□ 0.72
HOXC6P09630 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
HOXC6P09630 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
HOXC6P09630 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXC6P09630 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC6P09630 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
HOXC6P09630 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXC6P09630 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.53■□□□□ 0.72
HOXC6P09630 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HOXC6P09630 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXC6P09630 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXC6P09630 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC6P09630 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC6P09630 AC092474.2-201ENST00000424288 719 ntBASIC19.53■□□□□ 0.72
HOXC6P09630 AL671277.1-201ENST00000429656 993 ntBASIC19.53■□□□□ 0.72
HOXC6P09630 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXC6P09630 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXC6P09630 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC6P09630 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
HOXC6P09630 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC6P09630 AL512356.2-201ENST00000546955 174 ntBASIC19.53■□□□□ 0.72
HOXC6P09630 AQP6-203ENST00000551733 849 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXC6P09630 MIR4745-201ENST00000577608 62 ntBASIC19.53■□□□□ 0.72
HOXC6P09630 AC138761.1-201ENST00000584393 385 ntBASIC19.53■□□□□ 0.72
HOXC6P09630 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXC6P09630 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.53■□□□□ 0.72
HOXC6P09630 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
HOXC6P09630 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC6P09630 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC6P09630 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC19.53■□□□□ 0.72
HOXC6P09630 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC6P09630 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXC6P09630 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC19.53■□□□□ 0.72
HOXC6P09630 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
HOXC6P09630 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC6P09630 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXC6P09630 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXC6P09630 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC6P09630 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXC6P09630 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC6P09630 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.52■□□□□ 0.72
HOXC6P09630 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC6P09630 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC6P09630 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC6P09630 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC6P09630 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC6P09630 KRT8P48-201ENST00000515599 1220 ntBASIC19.52■□□□□ 0.72
HOXC6P09630 RNA5SP421-201ENST00000516864 134 ntBASIC19.52■□□□□ 0.72
HOXC6P09630 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC6P09630 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC6P09630 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC6P09630 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXC6P09630 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC6P09630 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXC6P09630 AJ011932.1-201ENST00000621707 465 ntBASIC19.52■□□□□ 0.72
HOXC6P09630 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC6P09630 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.52■□□□□ 0.72
HOXC6P09630 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
HOXC6P09630 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.52■□□□□ 0.72
HOXC6P09630 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
HOXC6P09630 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HOXC6P09630 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
HOXC6P09630 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.52■□□□□ 0.71
HOXC6P09630 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.52■□□□□ 0.71
HOXC6P09630 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
HOXC6P09630 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 70.8 ms