Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SFTPBP07988 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.18■□□□□ 0.02
SFTPBP07988 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.18■□□□□ 0.02
SFTPBP07988 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC15.18■□□□□ 0.02
SFTPBP07988 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
SFTPBP07988 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.18■□□□□ 0.02
SFTPBP07988 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.18■□□□□ 0.02
SFTPBP07988 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC15.18■□□□□ 0.02
SFTPBP07988 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SFTPBP07988 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC15.18■□□□□ 0.02
SFTPBP07988 AL136038.3-201ENST00000561909 1096 ntBASIC15.18■□□□□ 0.02
SFTPBP07988 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.18■□□□□ 0.02
SFTPBP07988 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SFTPBP07988 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 AC093458.2-201ENST00000623150 629 ntBASIC15.18■□□□□ 0.02
SFTPBP07988 AC116407.4-201ENST00000623319 1061 ntBASIC15.18■□□□□ 0.02
SFTPBP07988 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.18■□□□□ 0.02
SFTPBP07988 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC15.18■□□□□ 0.02
SFTPBP07988 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC15.18■□□□□ 0.02
SFTPBP07988 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SFTPBP07988 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SFTPBP07988 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SFTPBP07988 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 LINC00304-203ENST00000565008 1864 ntBASIC15.18■□□□□ 0.02
SFTPBP07988 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.18■□□□□ 0.02
SFTPBP07988 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SFTPBP07988 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SFTPBP07988 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SFTPBP07988 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.17■□□□□ 0.02
SFTPBP07988 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC15.17■□□□□ 0.02
SFTPBP07988 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
SFTPBP07988 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
SFTPBP07988 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC15.17■□□□□ 0.02
SFTPBP07988 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SFTPBP07988 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SFTPBP07988 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC15.17■□□□□ 0.02
SFTPBP07988 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.17■□□□□ 0.02
SFTPBP07988 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC15.17■□□□□ 0.02
SFTPBP07988 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 KRT18P65-201ENST00000439811 1286 ntBASIC15.17■□□□□ 0.02
SFTPBP07988 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.17■□□□□ 0.02
SFTPBP07988 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC15.17■□□□□ 0.02
SFTPBP07988 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC15.17■□□□□ 0.02
SFTPBP07988 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC15.17■□□□□ 0.02
SFTPBP07988 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC15.17■□□□□ 0.02
SFTPBP07988 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC15.17■□□□□ 0.02
SFTPBP07988 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.17■□□□□ 0.02
SFTPBP07988 TEN1-204ENST00000588202 862 ntTSL 3 BASIC15.17■□□□□ 0.02
SFTPBP07988 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
SFTPBP07988 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SFTPBP07988 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.17■□□□□ 0.02
SFTPBP07988 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.17■□□□□ 0.02
SFTPBP07988 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.17■□□□□ 0.02
SFTPBP07988 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 AC022211.2-201ENST00000585075 2527 ntBASIC15.17■□□□□ 0.02
SFTPBP07988 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.17■□□□□ 0.02
SFTPBP07988 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC15.17■□□□□ 0.02
SFTPBP07988 AC011676.5-201ENST00000624864 2660 ntBASIC15.17■□□□□ 0.02
SFTPBP07988 NKILA-202ENST00000614771 2598 ntBASIC15.17■□□□□ 0.02
SFTPBP07988 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC15.17■□□□□ 0.02
SFTPBP07988 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
SFTPBP07988 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
SFTPBP07988 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms