Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AC002558.1-201ENST00000488906 803 ntBASIC14.49□□□□□ -0.09
CTSDP07339 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
CTSDP07339 AC124947.2-201ENST00000547118 1133 ntBASIC14.49□□□□□ -0.09
CTSDP07339 DET1-205ENST00000558413 583 ntTSL 4 BASIC14.49□□□□□ -0.09
CTSDP07339 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC14.49□□□□□ -0.09
CTSDP07339 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC14.49□□□□□ -0.09
CTSDP07339 TK1-204ENST00000590430 683 ntTSL 3 BASIC14.49□□□□□ -0.09
CTSDP07339 AC024563.2-201ENST00000603282 481 ntBASIC14.49□□□□□ -0.09
CTSDP07339 AC009154.2-201ENST00000621177 724 ntBASIC14.49□□□□□ -0.09
CTSDP07339 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
CTSDP07339 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.49□□□□□ -0.09
CTSDP07339 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC14.49□□□□□ -0.09
CTSDP07339 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC14.49□□□□□ -0.09
CTSDP07339 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC14.49□□□□□ -0.09
CTSDP07339 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
CTSDP07339 AL391005.1-201ENST00000623953 2435 ntBASIC14.49□□□□□ -0.09
CTSDP07339 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
CTSDP07339 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
CTSDP07339 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC14.48□□□□□ -0.09
CTSDP07339 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC14.48□□□□□ -0.09
CTSDP07339 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC14.48□□□□□ -0.09
CTSDP07339 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
CTSDP07339 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
CTSDP07339 AC112698.1-201ENST00000510299 916 ntBASIC14.48□□□□□ -0.09
CTSDP07339 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC14.48□□□□□ -0.09
CTSDP07339 C2orf69P3-201ENST00000565542 1120 ntBASIC14.48□□□□□ -0.09
CTSDP07339 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC14.48□□□□□ -0.09
CTSDP07339 NEK4P2-201ENST00000580004 1012 ntBASIC14.48□□□□□ -0.09
CTSDP07339 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC14.48□□□□□ -0.09
CTSDP07339 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC14.48□□□□□ -0.09
CTSDP07339 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC14.48□□□□□ -0.09
CTSDP07339 AL157888.1-201ENST00000631930 593 ntBASIC14.48□□□□□ -0.09
CTSDP07339 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC14.48□□□□□ -0.09
CTSDP07339 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
CTSDP07339 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC14.48□□□□□ -0.09
CTSDP07339 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 KRT8P9-201ENST00000558927 1449 ntBASIC14.48□□□□□ -0.09
CTSDP07339 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
CTSDP07339 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
CTSDP07339 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.48□□□□□ -0.09
CTSDP07339 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC14.48□□□□□ -0.09
CTSDP07339 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC14.48□□□□□ -0.09
CTSDP07339 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC14.47□□□□□ -0.09
CTSDP07339 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC14.47□□□□□ -0.09
CTSDP07339 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC14.47□□□□□ -0.09
CTSDP07339 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
CTSDP07339 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 RBM17P1-201ENST00000453646 1190 ntBASIC14.47□□□□□ -0.09
CTSDP07339 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC14.47□□□□□ -0.09
CTSDP07339 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC14.47□□□□□ -0.09
CTSDP07339 FITM1-202ENST00000559294 800 ntBASIC14.47□□□□□ -0.09
CTSDP07339 AP003071.4-201ENST00000562276 1284 ntBASIC14.47□□□□□ -0.09
CTSDP07339 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC14.47□□□□□ -0.09
CTSDP07339 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC14.47□□□□□ -0.09
CTSDP07339 NT5C-210ENST00000582160 860 ntTSL 2 BASIC14.47□□□□□ -0.09
CTSDP07339 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
CTSDP07339 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
CTSDP07339 AC092068.3-201ENST00000587894 2016 ntBASIC14.47□□□□□ -0.09
CTSDP07339 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
CTSDP07339 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC14.47□□□□□ -0.09
CTSDP07339 AMT-250ENST00000637682 1823 ntTSL 5 BASIC14.47□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms