Protein–RNA interactions for Protein: P05997

COL5A2, Collagen alpha-2(V) chain, humanhuman

Predicted RBP Predictions only

Length 1,499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A2P05997 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
COL5A2P05997 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
COL5A2P05997 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL5A2P05997 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC22.64■■□□□ 1.21
COL5A2P05997 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL5A2P05997 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.21
COL5A2P05997 RNU1-129P-201ENST00000384064 167 ntBASIC22.64■■□□□ 1.21
COL5A2P05997 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL5A2P05997 AC241585.1-201ENST00000433527 519 ntBASIC22.64■■□□□ 1.21
COL5A2P05997 RN7SL692P-201ENST00000464677 288 ntBASIC22.64■■□□□ 1.21
COL5A2P05997 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC22.64■■□□□ 1.21
COL5A2P05997 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
COL5A2P05997 U1.21-201ENST00000580816 167 ntBASIC22.64■■□□□ 1.21
COL5A2P05997 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC22.64■■□□□ 1.21
COL5A2P05997 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC22.64■■□□□ 1.21
COL5A2P05997 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC22.64■■□□□ 1.21
COL5A2P05997 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL5A2P05997 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL5A2P05997 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
COL5A2P05997 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
COL5A2P05997 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL5A2P05997 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
COL5A2P05997 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL5A2P05997 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL5A2P05997 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL5A2P05997 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL5A2P05997 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL5A2P05997 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL5A2P05997 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
COL5A2P05997 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL5A2P05997 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL5A2P05997 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC22.63■■□□□ 1.21
COL5A2P05997 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL5A2P05997 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC22.63■■□□□ 1.21
COL5A2P05997 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC22.63■■□□□ 1.21
COL5A2P05997 CR383656.12-201ENST00000549567 513 ntBASIC22.63■■□□□ 1.21
COL5A2P05997 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC22.63■■□□□ 1.21
COL5A2P05997 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
COL5A2P05997 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC22.63■■□□□ 1.21
COL5A2P05997 MNT-208ENST00000575394 606 ntTSL 4 BASIC22.63■■□□□ 1.21
COL5A2P05997 MIR3909-201ENST00000579518 119 ntBASIC22.63■■□□□ 1.21
COL5A2P05997 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC22.63■■□□□ 1.21
COL5A2P05997 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC22.63■■□□□ 1.21
COL5A2P05997 AL031055.1-201ENST00000606362 631 ntBASIC22.63■■□□□ 1.21
COL5A2P05997 SRP9-204ENST00000619790 377 ntTSL 2 BASIC22.63■■□□□ 1.21
COL5A2P05997 AC100757.3-201ENST00000622361 1406 ntBASIC22.63■■□□□ 1.21
COL5A2P05997 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL5A2P05997 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC22.63■■□□□ 1.21
COL5A2P05997 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
COL5A2P05997 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
COL5A2P05997 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
COL5A2P05997 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
COL5A2P05997 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC22.62■■□□□ 1.21
COL5A2P05997 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
COL5A2P05997 MIR346-201ENST00000362234 95 ntBASIC22.62■■□□□ 1.21
COL5A2P05997 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL5A2P05997 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC22.62■■□□□ 1.21
COL5A2P05997 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC22.62■■□□□ 1.21
COL5A2P05997 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC22.62■■□□□ 1.21
COL5A2P05997 TMPRSS11CP-201ENST00000453277 683 ntBASIC22.62■■□□□ 1.21
COL5A2P05997 AL596325.1-201ENST00000563991 1082 ntBASIC22.62■■□□□ 1.21
COL5A2P05997 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
COL5A2P05997 AL662799.1-202ENST00000614205 422 ntBASIC22.62■■□□□ 1.21
COL5A2P05997 HLA-DQB1-201ENST00000374943 1656 ntBASIC22.62■■□□□ 1.21
COL5A2P05997 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL5A2P05997 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC22.62■■□□□ 1.21
COL5A2P05997 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL5A2P05997 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC22.62■■□□□ 1.21
COL5A2P05997 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL5A2P05997 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL5A2P05997 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL5A2P05997 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
COL5A2P05997 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC22.62■■□□□ 1.21
COL5A2P05997 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL5A2P05997 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC22.61■■□□□ 1.21
COL5A2P05997 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL5A2P05997 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL5A2P05997 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL5A2P05997 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL5A2P05997 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL5A2P05997 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
COL5A2P05997 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC22.61■■□□□ 1.21
COL5A2P05997 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC22.61■■□□□ 1.21
COL5A2P05997 SPDYE12P-201ENST00000618416 771 ntBASIC22.61■■□□□ 1.21
COL5A2P05997 AL358472.5-202ENST00000641448 1267 ntBASIC22.61■■□□□ 1.21
COL5A2P05997 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC22.61■■□□□ 1.21
COL5A2P05997 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL5A2P05997 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC22.61■■□□□ 1.21
COL5A2P05997 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
COL5A2P05997 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC22.61■■□□□ 1.21
COL5A2P05997 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL5A2P05997 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
COL5A2P05997 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC22.6■■□□□ 1.21
COL5A2P05997 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
COL5A2P05997 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL5A2P05997 AL512638.1-201ENST00000457493 794 ntBASIC22.6■■□□□ 1.21
COL5A2P05997 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC22.6■■□□□ 1.21
COL5A2P05997 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
COL5A2P05997 AC027307.2-201ENST00000591252 911 ntBASIC22.6■■□□□ 1.21
COL5A2P05997 AC009118.2-201ENST00000613275 655 ntBASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms