Protein–RNA interactions for Protein: P01033

TIMP1, Metalloproteinase inhibitor 1, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1P01033 TDG-209ENST00000544861 1387 ntTSL 2 BASIC18.65■□□□□ 0.58
TIMP1P01033 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMP1P01033 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TIMP1P01033 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.65■□□□□ 0.58
TIMP1P01033 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC18.65■□□□□ 0.58
TIMP1P01033 AC012569.1-201ENST00000591191 1524 ntBASIC18.64■□□□□ 0.58
TIMP1P01033 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
TIMP1P01033 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TIMP1P01033 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC18.64■□□□□ 0.57
TIMP1P01033 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMP1P01033 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC18.64■□□□□ 0.57
TIMP1P01033 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TIMP1P01033 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMP1P01033 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TIMP1P01033 COX5BP8-201ENST00000416911 349 ntBASIC18.64■□□□□ 0.57
TIMP1P01033 RN7SL692P-201ENST00000464677 288 ntBASIC18.64■□□□□ 0.57
TIMP1P01033 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC18.64■□□□□ 0.57
TIMP1P01033 COQ9-214ENST00000567933 882 ntTSL 3 BASIC18.64■□□□□ 0.57
TIMP1P01033 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
TIMP1P01033 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.64■□□□□ 0.57
TIMP1P01033 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMP1P01033 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMP1P01033 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TIMP1P01033 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC18.64■□□□□ 0.57
TIMP1P01033 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC18.64■□□□□ 0.57
TIMP1P01033 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.64■□□□□ 0.57
TIMP1P01033 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.64■□□□□ 0.57
TIMP1P01033 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMP1P01033 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
TIMP1P01033 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMP1P01033 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.63■□□□□ 0.57
TIMP1P01033 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.63■□□□□ 0.57
TIMP1P01033 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMP1P01033 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMP1P01033 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMP1P01033 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC18.63■□□□□ 0.57
TIMP1P01033 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TIMP1P01033 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TIMP1P01033 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC18.63■□□□□ 0.57
TIMP1P01033 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TIMP1P01033 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC18.63■□□□□ 0.57
TIMP1P01033 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC18.63■□□□□ 0.57
TIMP1P01033 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC18.63■□□□□ 0.57
TIMP1P01033 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC18.63■□□□□ 0.57
TIMP1P01033 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TIMP1P01033 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TIMP1P01033 AC008267.7-201ENST00000624570 1194 ntBASIC18.63■□□□□ 0.57
TIMP1P01033 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TIMP1P01033 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.63■□□□□ 0.57
TIMP1P01033 AP000997.3-201ENST00000623333 2250 ntBASIC18.63■□□□□ 0.57
TIMP1P01033 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMP1P01033 WASH6P-202ENST00000359512 1437 ntBASIC18.63■□□□□ 0.57
TIMP1P01033 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.63■□□□□ 0.57
TIMP1P01033 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TIMP1P01033 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.63■□□□□ 0.57
TIMP1P01033 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TIMP1P01033 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TIMP1P01033 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.63■□□□□ 0.57
TIMP1P01033 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIMP1P01033 MIR346-201ENST00000362234 95 ntBASIC18.62■□□□□ 0.57
TIMP1P01033 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIMP1P01033 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIMP1P01033 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC18.62■□□□□ 0.57
TIMP1P01033 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TIMP1P01033 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC18.62■□□□□ 0.57
TIMP1P01033 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.62■□□□□ 0.57
TIMP1P01033 AP000842.3-202ENST00000569238 1080 ntBASIC18.62■□□□□ 0.57
TIMP1P01033 MIR4453-201ENST00000584019 89 ntBASIC18.62■□□□□ 0.57
TIMP1P01033 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.62■□□□□ 0.57
TIMP1P01033 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIMP1P01033 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC18.62■□□□□ 0.57
TIMP1P01033 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.62■□□□□ 0.57
TIMP1P01033 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC18.62■□□□□ 0.57
TIMP1P01033 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC18.62■□□□□ 0.57
TIMP1P01033 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIMP1P01033 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TIMP1P01033 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TIMP1P01033 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TIMP1P01033 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TIMP1P01033 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
TIMP1P01033 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.61■□□□□ 0.57
TIMP1P01033 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.61■□□□□ 0.57
TIMP1P01033 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.61■□□□□ 0.57
TIMP1P01033 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC18.61■□□□□ 0.57
TIMP1P01033 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TIMP1P01033 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.61■□□□□ 0.57
TIMP1P01033 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC18.61■□□□□ 0.57
TIMP1P01033 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms