Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
TOMM40O96008 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC13.68□□□□□ -0.22
TOMM40O96008 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.68□□□□□ -0.22
TOMM40O96008 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC13.68□□□□□ -0.22
TOMM40O96008 LYSMD4-203ENST00000378904 2122 ntBASIC13.68□□□□□ -0.22
TOMM40O96008 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 AL359075.1-203ENST00000462729 1002 ntBASIC13.68□□□□□ -0.22
TOMM40O96008 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 FGF14-AS2-201ENST00000606448 1074 ntBASIC13.68□□□□□ -0.22
TOMM40O96008 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC13.68□□□□□ -0.22
TOMM40O96008 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 AC066615.1-201ENST00000640911 628 ntBASIC13.68□□□□□ -0.22
TOMM40O96008 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC13.68□□□□□ -0.22
TOMM40O96008 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
TOMM40O96008 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC13.68□□□□□ -0.22
TOMM40O96008 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
TOMM40O96008 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
TOMM40O96008 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC13.68□□□□□ -0.22
TOMM40O96008 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC13.67□□□□□ -0.22
TOMM40O96008 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TOMM40O96008 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC13.67□□□□□ -0.22
TOMM40O96008 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC13.67□□□□□ -0.22
TOMM40O96008 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 FER1L4-210ENST00000615531 5998 ntBASIC13.67□□□□□ -0.22
TOMM40O96008 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC13.67□□□□□ -0.22
TOMM40O96008 LINC01311-201ENST00000565162 1445 ntBASIC13.67□□□□□ -0.22
TOMM40O96008 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
TOMM40O96008 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC13.67□□□□□ -0.22
TOMM40O96008 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.67□□□□□ -0.22
TOMM40O96008 AC096633.1-201ENST00000422446 749 ntBASIC13.67□□□□□ -0.22
TOMM40O96008 AC117947.1-201ENST00000427448 529 ntBASIC13.67□□□□□ -0.22
TOMM40O96008 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 AC068472.1-201ENST00000474589 881 ntBASIC13.67□□□□□ -0.22
TOMM40O96008 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.67□□□□□ -0.22
TOMM40O96008 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC13.67□□□□□ -0.22
TOMM40O96008 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 AC012306.2-201ENST00000609350 630 ntBASIC13.67□□□□□ -0.22
TOMM40O96008 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
TOMM40O96008 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TOMM40O96008 AC073912.3-201ENST00000624414 853 ntBASIC13.67□□□□□ -0.22
TOMM40O96008 AC097493.4-201ENST00000641197 219 ntBASIC13.67□□□□□ -0.22
TOMM40O96008 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
TOMM40O96008 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TOMM40O96008 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
TOMM40O96008 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC13.67□□□□□ -0.22
TOMM40O96008 CCR7-203ENST00000579344 1874 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC13.67□□□□□ -0.22
TOMM40O96008 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.67□□□□□ -0.22
TOMM40O96008 CYTH2-204ENST00000452733 4780 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
TOMM40O96008 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
TOMM40O96008 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC13.66□□□□□ -0.22
TOMM40O96008 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC13.66□□□□□ -0.22
TOMM40O96008 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
TOMM40O96008 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
TOMM40O96008 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms