Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG5O95196 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG5O95196 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CSPG5O95196 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG5O95196 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CSPG5O95196 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC18.68■□□□□ 0.58
CSPG5O95196 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG5O95196 AC097637.2-201ENST00000624096 1997 ntBASIC18.68■□□□□ 0.58
CSPG5O95196 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.68■□□□□ 0.58
CSPG5O95196 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG5O95196 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CSPG5O95196 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CSPG5O95196 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG5O95196 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.67■□□□□ 0.58
CSPG5O95196 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CSPG5O95196 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG5O95196 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC18.67■□□□□ 0.58
CSPG5O95196 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG5O95196 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG5O95196 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.67■□□□□ 0.58
CSPG5O95196 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CSPG5O95196 AL139400.1-201ENST00000366220 510 ntBASIC18.67■□□□□ 0.58
CSPG5O95196 COX5BP2-201ENST00000392354 334 ntBASIC18.67■□□□□ 0.58
CSPG5O95196 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
CSPG5O95196 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC18.67■□□□□ 0.58
CSPG5O95196 SIGLEC30P-201ENST00000455569 941 ntBASIC18.67■□□□□ 0.58
CSPG5O95196 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
CSPG5O95196 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC18.67■□□□□ 0.58
CSPG5O95196 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CSPG5O95196 PDPK2P-202ENST00000562415 1191 ntBASIC18.67■□□□□ 0.58
CSPG5O95196 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG5O95196 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG5O95196 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG5O95196 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CSPG5O95196 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
CSPG5O95196 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG5O95196 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG5O95196 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CSPG5O95196 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CSPG5O95196 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG5O95196 AL353593.2-201ENST00000602529 1483 ntBASIC18.66■□□□□ 0.58
CSPG5O95196 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG5O95196 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG5O95196 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.66■□□□□ 0.58
CSPG5O95196 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG5O95196 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG5O95196 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC18.66■□□□□ 0.58
CSPG5O95196 PTCHD3P3-201ENST00000403073 906 ntBASIC18.66■□□□□ 0.58
CSPG5O95196 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.66■□□□□ 0.58
CSPG5O95196 MKNK2P1-201ENST00000437526 628 ntBASIC18.66■□□□□ 0.58
CSPG5O95196 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CSPG5O95196 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG5O95196 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG5O95196 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC18.66■□□□□ 0.58
CSPG5O95196 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.66■□□□□ 0.58
CSPG5O95196 AC091812.2-201ENST00000619081 385 ntBASIC18.66■□□□□ 0.58
CSPG5O95196 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.66■□□□□ 0.58
CSPG5O95196 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.66■□□□□ 0.58
CSPG5O95196 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG5O95196 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG5O95196 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG5O95196 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG5O95196 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG5O95196 AC093010.1-201ENST00000473625 1624 ntBASIC18.66■□□□□ 0.58
CSPG5O95196 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG5O95196 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC18.66■□□□□ 0.58
CSPG5O95196 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG5O95196 FZD10-202ENST00000539839 3282 ntBASIC18.66■□□□□ 0.58
CSPG5O95196 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CSPG5O95196 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CSPG5O95196 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC18.66■□□□□ 0.58
CSPG5O95196 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG5O95196 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CSPG5O95196 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.65■□□□□ 0.58
CSPG5O95196 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.65■□□□□ 0.58
CSPG5O95196 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG5O95196 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG5O95196 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG5O95196 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG5O95196 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG5O95196 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CSPG5O95196 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG5O95196 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.65■□□□□ 0.58
CSPG5O95196 CD99-202ENST00000381180 530 ntTSL 2 BASIC18.65■□□□□ 0.58
CSPG5O95196 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC18.65■□□□□ 0.58
CSPG5O95196 PRSS29P-201ENST00000440800 595 ntBASIC18.65■□□□□ 0.58
CSPG5O95196 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.65■□□□□ 0.58
CSPG5O95196 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.65■□□□□ 0.58
CSPG5O95196 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC18.65■□□□□ 0.58
CSPG5O95196 AC010654.1-201ENST00000615722 808 ntBASIC18.65■□□□□ 0.58
CSPG5O95196 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CSPG5O95196 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CSPG5O95196 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG5O95196 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CSPG5O95196 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG5O95196 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
CSPG5O95196 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CSPG5O95196 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC18.65■□□□□ 0.58
CSPG5O95196 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.65■□□□□ 0.58
CSPG5O95196 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 65.4 ms