Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM3O75382 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM3O75382 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.29■□□□□ 0.2
TRIM3O75382 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM3O75382 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM3O75382 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM3O75382 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM3O75382 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM3O75382 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM3O75382 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.29■□□□□ 0.2
TRIM3O75382 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM3O75382 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC16.29■□□□□ 0.2
TRIM3O75382 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.29■□□□□ 0.2
TRIM3O75382 MIR5100-201ENST00000579544 119 ntBASIC16.29■□□□□ 0.2
TRIM3O75382 RN7SL510P-201ENST00000581311 263 ntBASIC16.29■□□□□ 0.2
TRIM3O75382 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM3O75382 LINC01711-201ENST00000598340 967 ntBASIC16.29■□□□□ 0.2
TRIM3O75382 AL121894.2-201ENST00000602977 491 ntBASIC16.29■□□□□ 0.2
TRIM3O75382 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM3O75382 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
TRIM3O75382 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM3O75382 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM3O75382 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM3O75382 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
TRIM3O75382 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
TRIM3O75382 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.29■□□□□ 0.2
TRIM3O75382 GNE-204ENST00000539208 2190 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM3O75382 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM3O75382 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
TRIM3O75382 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRIM3O75382 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM3O75382 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM3O75382 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM3O75382 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM3O75382 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM3O75382 AC097374.2-201ENST00000618617 1306 ntBASIC16.28■□□□□ 0.2
TRIM3O75382 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRIM3O75382 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM3O75382 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM3O75382 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM3O75382 RCN1P2-201ENST00000398357 915 ntBASIC16.28■□□□□ 0.2
TRIM3O75382 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM3O75382 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM3O75382 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
TRIM3O75382 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM3O75382 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM3O75382 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.28■□□□□ 0.2
TRIM3O75382 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.28■□□□□ 0.2
TRIM3O75382 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
TRIM3O75382 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC16.28■□□□□ 0.2
TRIM3O75382 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
TRIM3O75382 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM3O75382 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM3O75382 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM3O75382 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM3O75382 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM3O75382 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM3O75382 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM3O75382 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TRIM3O75382 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRIM3O75382 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM3O75382 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM3O75382 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRIM3O75382 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM3O75382 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM3O75382 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM3O75382 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
TRIM3O75382 KRT8P47-201ENST00000604727 1398 ntBASIC16.27■□□□□ 0.2
TRIM3O75382 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
TRIM3O75382 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM3O75382 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM3O75382 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM3O75382 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM3O75382 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM3O75382 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM3O75382 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM3O75382 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM3O75382 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM3O75382 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM3O75382 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM3O75382 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC16.27■□□□□ 0.2
TRIM3O75382 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM3O75382 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM3O75382 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM3O75382 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
TRIM3O75382 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM3O75382 AC011467.2-201ENST00000598425 242 ntBASIC16.27■□□□□ 0.2
TRIM3O75382 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM3O75382 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.27■□□□□ 0.2
TRIM3O75382 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.27■□□□□ 0.2
TRIM3O75382 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM3O75382 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TRIM3O75382 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
TRIM3O75382 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM3O75382 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC16.27■□□□□ 0.19
TRIM3O75382 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM3O75382 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TRIM3O75382 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC16.27■□□□□ 0.19
TRIM3O75382 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC16.27■□□□□ 0.19
TRIM3O75382 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms