Protein–RNA interactions for Protein: O60890

OPHN1, Oligophrenin-1, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPHN1O60890 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OPHN1O60890 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPHN1O60890 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
OPHN1O60890 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OPHN1O60890 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPHN1O60890 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
OPHN1O60890 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPHN1O60890 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
OPHN1O60890 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPHN1O60890 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.21■□□□□ 0.51
OPHN1O60890 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
OPHN1O60890 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.21■□□□□ 0.51
OPHN1O60890 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC18.21■□□□□ 0.51
OPHN1O60890 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC18.21■□□□□ 0.51
OPHN1O60890 ABR-204ENST00000543210 1049 ntTSL 2 BASIC18.21■□□□□ 0.51
OPHN1O60890 AP001005.1-201ENST00000571755 1248 ntBASIC18.21■□□□□ 0.51
OPHN1O60890 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC18.21■□□□□ 0.51
OPHN1O60890 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18.21■□□□□ 0.51
OPHN1O60890 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC18.21■□□□□ 0.51
OPHN1O60890 AF228730.7-201ENST00000641842 219 ntBASIC18.21■□□□□ 0.51
OPHN1O60890 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPHN1O60890 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OPHN1O60890 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.21■□□□□ 0.51
OPHN1O60890 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OPHN1O60890 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
OPHN1O60890 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
OPHN1O60890 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
OPHN1O60890 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
OPHN1O60890 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.21■□□□□ 0.5
OPHN1O60890 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
OPHN1O60890 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.5
OPHN1O60890 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.5
OPHN1O60890 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPHN1O60890 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPHN1O60890 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPHN1O60890 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
OPHN1O60890 HLA-J-201ENST00000462773 1622 ntBASIC18.2■□□□□ 0.5
OPHN1O60890 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
OPHN1O60890 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.2■□□□□ 0.5
OPHN1O60890 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPHN1O60890 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.2■□□□□ 0.5
OPHN1O60890 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.2■□□□□ 0.5
OPHN1O60890 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC18.2■□□□□ 0.5
OPHN1O60890 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
OPHN1O60890 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPHN1O60890 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
OPHN1O60890 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
OPHN1O60890 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPHN1O60890 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC18.2■□□□□ 0.5
OPHN1O60890 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPHN1O60890 AKR1C7P-201ENST00000305623 895 ntBASIC18.2■□□□□ 0.5
OPHN1O60890 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
OPHN1O60890 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
OPHN1O60890 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPHN1O60890 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
OPHN1O60890 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.2■□□□□ 0.5
OPHN1O60890 IGHV3-47-201ENST00000425060 335 ntBASIC18.2■□□□□ 0.5
OPHN1O60890 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
OPHN1O60890 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
OPHN1O60890 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
OPHN1O60890 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.2■□□□□ 0.5
OPHN1O60890 REXO1L6P-202ENST00000619970 1078 ntBASIC18.2■□□□□ 0.5
OPHN1O60890 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.2■□□□□ 0.5
OPHN1O60890 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.2■□□□□ 0.5
OPHN1O60890 AC124864.1-201ENST00000623408 392 ntBASIC18.2■□□□□ 0.5
OPHN1O60890 LINC01451-201ENST00000623792 534 ntBASIC18.2■□□□□ 0.5
OPHN1O60890 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.2■□□□□ 0.5
OPHN1O60890 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
OPHN1O60890 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC18.2■□□□□ 0.5
OPHN1O60890 AL138688.1-201ENST00000624851 1594 ntBASIC18.2■□□□□ 0.5
OPHN1O60890 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC18.2■□□□□ 0.5
OPHN1O60890 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC18.2■□□□□ 0.5
OPHN1O60890 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.2■□□□□ 0.5
OPHN1O60890 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
OPHN1O60890 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
OPHN1O60890 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
OPHN1O60890 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
OPHN1O60890 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OPHN1O60890 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OPHN1O60890 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OPHN1O60890 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.19■□□□□ 0.5
OPHN1O60890 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
OPHN1O60890 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OPHN1O60890 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
OPHN1O60890 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC18.19■□□□□ 0.5
OPHN1O60890 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
OPHN1O60890 PPIE-208ENST00000470213 927 ntTSL 3 BASIC18.19■□□□□ 0.5
OPHN1O60890 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.19■□□□□ 0.5
OPHN1O60890 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
OPHN1O60890 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OPHN1O60890 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
OPHN1O60890 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OPHN1O60890 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.19■□□□□ 0.5
OPHN1O60890 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
OPHN1O60890 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.19■□□□□ 0.5
OPHN1O60890 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
OPHN1O60890 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
OPHN1O60890 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
OPHN1O60890 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms