Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HCN1O60741 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
HCN1O60741 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCN1O60741 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCN1O60741 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HCN1O60741 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.32■□□□□ 0.2
HCN1O60741 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.32■□□□□ 0.2
HCN1O60741 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC16.32■□□□□ 0.2
HCN1O60741 AC068472.1-201ENST00000474589 881 ntBASIC16.32■□□□□ 0.2
HCN1O60741 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.32■□□□□ 0.2
HCN1O60741 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
HCN1O60741 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.32■□□□□ 0.2
HCN1O60741 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.32■□□□□ 0.2
HCN1O60741 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.32■□□□□ 0.2
HCN1O60741 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.32■□□□□ 0.2
HCN1O60741 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCN1O60741 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.32■□□□□ 0.2
HCN1O60741 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCN1O60741 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
HCN1O60741 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 AC108860.2-201ENST00000562760 2183 ntBASIC16.31■□□□□ 0.2
HCN1O60741 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
HCN1O60741 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
HCN1O60741 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
HCN1O60741 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC16.31■□□□□ 0.2
HCN1O60741 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 AC132938.6-201ENST00000623828 1655 ntBASIC16.31■□□□□ 0.2
HCN1O60741 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.31■□□□□ 0.2
HCN1O60741 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.31■□□□□ 0.2
HCN1O60741 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 KRT18P65-201ENST00000439811 1286 ntBASIC16.31■□□□□ 0.2
HCN1O60741 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.31■□□□□ 0.2
HCN1O60741 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.31■□□□□ 0.2
HCN1O60741 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.31■□□□□ 0.2
HCN1O60741 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.31■□□□□ 0.2
HCN1O60741 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
HCN1O60741 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC16.31■□□□□ 0.2
HCN1O60741 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC16.31■□□□□ 0.2
HCN1O60741 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.31■□□□□ 0.2
HCN1O60741 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
HCN1O60741 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.3■□□□□ 0.2
HCN1O60741 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HCN1O60741 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.3■□□□□ 0.2
HCN1O60741 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.3■□□□□ 0.2
HCN1O60741 AC091607.1-201ENST00000490318 1060 ntBASIC16.3■□□□□ 0.2
HCN1O60741 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
HCN1O60741 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.3■□□□□ 0.2
HCN1O60741 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.3■□□□□ 0.2
HCN1O60741 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC16.3■□□□□ 0.2
HCN1O60741 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.3■□□□□ 0.2
HCN1O60741 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
HCN1O60741 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.3■□□□□ 0.2
HCN1O60741 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC16.3■□□□□ 0.2
HCN1O60741 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
HCN1O60741 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HCN1O60741 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC16.3■□□□□ 0.2
HCN1O60741 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms