Protein–RNA interactions for Protein: O43353

RIPK2, Receptor-interacting serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK2O43353 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
RIPK2O43353 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
RIPK2O43353 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.7■□□□□ 0.42
RIPK2O43353 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.7■□□□□ 0.42
RIPK2O43353 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
RIPK2O43353 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.7■□□□□ 0.42
RIPK2O43353 HMGA1P5-201ENST00000412453 271 ntBASIC17.7■□□□□ 0.42
RIPK2O43353 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.7■□□□□ 0.42
RIPK2O43353 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.7■□□□□ 0.42
RIPK2O43353 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.7■□□□□ 0.42
RIPK2O43353 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
RIPK2O43353 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.7■□□□□ 0.42
RIPK2O43353 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.7■□□□□ 0.42
RIPK2O43353 AC010947.1-201ENST00000623454 693 ntBASIC17.7■□□□□ 0.42
RIPK2O43353 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC17.7■□□□□ 0.42
RIPK2O43353 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RIPK2O43353 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.7■□□□□ 0.42
RIPK2O43353 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC17.7■□□□□ 0.42
RIPK2O43353 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.7■□□□□ 0.42
RIPK2O43353 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.7■□□□□ 0.42
RIPK2O43353 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.7■□□□□ 0.42
RIPK2O43353 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RIPK2O43353 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RIPK2O43353 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
RIPK2O43353 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RIPK2O43353 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RIPK2O43353 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC17.69■□□□□ 0.42
RIPK2O43353 AL391807.1-203ENST00000604392 2365 ntBASIC17.69■□□□□ 0.42
RIPK2O43353 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RIPK2O43353 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RIPK2O43353 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.69■□□□□ 0.42
RIPK2O43353 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RIPK2O43353 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RIPK2O43353 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RIPK2O43353 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.69■□□□□ 0.42
RIPK2O43353 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RIPK2O43353 ECEL1P3-201ENST00000427961 737 ntBASIC17.69■□□□□ 0.42
RIPK2O43353 AC034232.1-201ENST00000506026 1064 ntBASIC17.69■□□□□ 0.42
RIPK2O43353 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.69■□□□□ 0.42
RIPK2O43353 AL355075.4-201ENST00000554988 638 ntBASIC17.69■□□□□ 0.42
RIPK2O43353 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.69■□□□□ 0.42
RIPK2O43353 GCSHP2-201ENST00000560971 527 ntBASIC17.69■□□□□ 0.42
RIPK2O43353 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.69■□□□□ 0.42
RIPK2O43353 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
RIPK2O43353 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
RIPK2O43353 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RIPK2O43353 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
RIPK2O43353 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RIPK2O43353 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RIPK2O43353 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC17.69■□□□□ 0.42
RIPK2O43353 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
RIPK2O43353 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.69■□□□□ 0.42
RIPK2O43353 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RIPK2O43353 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RIPK2O43353 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC17.69■□□□□ 0.42
RIPK2O43353 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.69■□□□□ 0.42
RIPK2O43353 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC17.68■□□□□ 0.42
RIPK2O43353 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
RIPK2O43353 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RIPK2O43353 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
RIPK2O43353 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
RIPK2O43353 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
RIPK2O43353 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RIPK2O43353 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
RIPK2O43353 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
RIPK2O43353 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
RIPK2O43353 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RIPK2O43353 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.68■□□□□ 0.42
RIPK2O43353 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.68■□□□□ 0.42
RIPK2O43353 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.68■□□□□ 0.42
RIPK2O43353 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RIPK2O43353 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
RIPK2O43353 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
RIPK2O43353 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
RIPK2O43353 DDT-203ENST00000403754 569 ntTSL 3 BASIC17.68■□□□□ 0.42
RIPK2O43353 DDT-206ENST00000430101 573 ntTSL 2 BASIC17.68■□□□□ 0.42
RIPK2O43353 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.68■□□□□ 0.42
RIPK2O43353 ECEL1P2-202ENST00000465689 757 ntBASIC17.68■□□□□ 0.42
RIPK2O43353 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.68■□□□□ 0.42
RIPK2O43353 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC17.68■□□□□ 0.42
RIPK2O43353 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC17.68■□□□□ 0.42
RIPK2O43353 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms