Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCL21O00585 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.27■□□□□ 0.03
CCL21O00585 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
CCL21O00585 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.03
CCL21O00585 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL21O00585 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.03
CCL21O00585 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC15.27■□□□□ 0.03
CCL21O00585 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CCL21O00585 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL21O00585 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
CCL21O00585 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC15.26■□□□□ 0.03
CCL21O00585 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL21O00585 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL21O00585 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCL21O00585 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL21O00585 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL21O00585 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL21O00585 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CCL21O00585 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL21O00585 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CCL21O00585 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL21O00585 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCL21O00585 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL21O00585 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL21O00585 PMS2P4-201ENST00000412466 1052 ntBASIC15.26■□□□□ 0.03
CCL21O00585 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL21O00585 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC15.26■□□□□ 0.03
CCL21O00585 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL21O00585 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL21O00585 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC15.26■□□□□ 0.03
CCL21O00585 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCL21O00585 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC15.26■□□□□ 0.03
CCL21O00585 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC15.26■□□□□ 0.03
CCL21O00585 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL21O00585 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC15.26■□□□□ 0.03
CCL21O00585 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CCL21O00585 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL21O00585 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CCL21O00585 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL21O00585 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC15.26■□□□□ 0.03
CCL21O00585 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CCL21O00585 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.26■□□□□ 0.03
CCL21O00585 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL21O00585 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL21O00585 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL21O00585 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CCL21O00585 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL21O00585 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL21O00585 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL21O00585 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CCL21O00585 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CCL21O00585 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.26■□□□□ 0.03
CCL21O00585 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL21O00585 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC15.25■□□□□ 0.03
CCL21O00585 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL21O00585 AC046185.3-201ENST00000623228 1824 ntBASIC15.25■□□□□ 0.03
CCL21O00585 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 NUDT4P1-201ENST00000322209 1206 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
CCL21O00585 ENSA-206ENST00000361631 725 ntTSL 2 BASIC15.25■□□□□ 0.03
CCL21O00585 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 AL355306.1-201ENST00000415580 579 ntBASIC15.25■□□□□ 0.03
CCL21O00585 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL21O00585 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.25■□□□□ 0.03
CCL21O00585 ADH5P3-201ENST00000433842 1137 ntBASIC15.25■□□□□ 0.03
CCL21O00585 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 AL592309.1-201ENST00000443127 649 ntBASIC15.25■□□□□ 0.03
CCL21O00585 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL21O00585 INGX-202ENST00000489074 768 ntBASIC15.25■□□□□ 0.03
CCL21O00585 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
CCL21O00585 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC15.25■□□□□ 0.03
CCL21O00585 AC190387.1-201ENST00000551683 408 ntBASIC15.25■□□□□ 0.03
CCL21O00585 DUX4L27-201ENST00000554796 1261 ntBASIC15.25■□□□□ 0.03
CCL21O00585 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC15.25■□□□□ 0.03
CCL21O00585 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.25■□□□□ 0.03
CCL21O00585 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL21O00585 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL21O00585 AJ011932.1-201ENST00000621707 465 ntBASIC15.25■□□□□ 0.03
CCL21O00585 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL21O00585 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC15.25■□□□□ 0.03
CCL21O00585 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 AL135999.2-201ENST00000622438 1686 ntBASIC15.25■□□□□ 0.03
CCL21O00585 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CCL21O00585 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms