Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.63■□□□□ 0.25
PDLIM1O00151 FAM45BP-202ENST00000592932 1624 ntBASIC16.63■□□□□ 0.25
PDLIM1O00151 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM1O00151 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PDLIM1O00151 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM1O00151 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PDLIM1O00151 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM1O00151 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM1O00151 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM1O00151 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM1O00151 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM1O00151 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PDLIM1O00151 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.63■□□□□ 0.25
PDLIM1O00151 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.63■□□□□ 0.25
PDLIM1O00151 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PDLIM1O00151 RCN1P1-201ENST00000400413 996 ntBASIC16.63■□□□□ 0.25
PDLIM1O00151 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.63■□□□□ 0.25
PDLIM1O00151 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM1O00151 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PDLIM1O00151 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM1O00151 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM1O00151 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM1O00151 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
PDLIM1O00151 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
PDLIM1O00151 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM1O00151 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.63■□□□□ 0.25
PDLIM1O00151 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM1O00151 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
PDLIM1O00151 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM1O00151 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
PDLIM1O00151 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
PDLIM1O00151 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
PDLIM1O00151 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PDLIM1O00151 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
PDLIM1O00151 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC16.62■□□□□ 0.25
PDLIM1O00151 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC16.62■□□□□ 0.25
PDLIM1O00151 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC16.62■□□□□ 0.25
PDLIM1O00151 TERF1P1-201ENST00000311003 1181 ntBASIC16.62■□□□□ 0.25
PDLIM1O00151 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.62■□□□□ 0.25
PDLIM1O00151 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.62■□□□□ 0.25
PDLIM1O00151 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.62■□□□□ 0.25
PDLIM1O00151 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.62■□□□□ 0.25
PDLIM1O00151 MIR4674-201ENST00000582457 87 ntBASIC16.62■□□□□ 0.25
PDLIM1O00151 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
PDLIM1O00151 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.62■□□□□ 0.25
PDLIM1O00151 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PDLIM1O00151 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
PDLIM1O00151 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.62■□□□□ 0.25
PDLIM1O00151 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PDLIM1O00151 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC16.61■□□□□ 0.25
PDLIM1O00151 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PDLIM1O00151 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM1O00151 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM1O00151 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM1O00151 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC16.61■□□□□ 0.25
PDLIM1O00151 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.61■□□□□ 0.25
PDLIM1O00151 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM1O00151 BBS7-204ENST00000506636 2570 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM1O00151 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM1O00151 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PDLIM1O00151 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC16.61■□□□□ 0.25
PDLIM1O00151 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC16.61■□□□□ 0.25
PDLIM1O00151 REXO1L11P-201ENST00000620964 1927 ntBASIC16.61■□□□□ 0.25
PDLIM1O00151 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM1O00151 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PDLIM1O00151 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM1O00151 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM1O00151 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM1O00151 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.61■□□□□ 0.25
PDLIM1O00151 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC16.61■□□□□ 0.25
PDLIM1O00151 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
PDLIM1O00151 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PDLIM1O00151 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PDLIM1O00151 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM1O00151 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PDLIM1O00151 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC16.61■□□□□ 0.25
PDLIM1O00151 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC16.61■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms