Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
CCDC188H7C350 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC188H7C350 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC188H7C350 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC18.13■□□□□ 0.49
CCDC188H7C350 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CCDC188H7C350 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC188H7C350 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC188H7C350 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC188H7C350 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
CCDC188H7C350 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC188H7C350 AC026691.1-201ENST00000602502 2017 ntBASIC18.12■□□□□ 0.49
CCDC188H7C350 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC188H7C350 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC188H7C350 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC188H7C350 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.12■□□□□ 0.49
CCDC188H7C350 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC188H7C350 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
CCDC188H7C350 AC141257.4-201ENST00000634557 245 ntBASIC18.12■□□□□ 0.49
CCDC188H7C350 AC136944.6-201ENST00000634818 245 ntBASIC18.12■□□□□ 0.49
CCDC188H7C350 AL139384.1-201ENST00000612143 3047 ntBASIC18.12■□□□□ 0.49
CCDC188H7C350 CROCCP1-201ENST00000426910 5675 ntBASIC18.12■□□□□ 0.49
CCDC188H7C350 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC188H7C350 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.12■□□□□ 0.49
CCDC188H7C350 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC188H7C350 TBC1D3P5-201ENST00000579401 1545 ntBASIC18.12■□□□□ 0.49
CCDC188H7C350 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC18.12■□□□□ 0.49
CCDC188H7C350 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC188H7C350 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC188H7C350 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC188H7C350 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC188H7C350 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC188H7C350 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
CCDC188H7C350 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
CCDC188H7C350 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC188H7C350 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC188H7C350 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC188H7C350 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
CCDC188H7C350 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC188H7C350 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC188H7C350 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC188H7C350 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC188H7C350 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC188H7C350 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC188H7C350 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC188H7C350 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC188H7C350 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.11■□□□□ 0.49
CCDC188H7C350 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC188H7C350 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC188H7C350 HLA-F-220ENST00000434407 884 ntBASIC18.11■□□□□ 0.49
CCDC188H7C350 AC068472.1-201ENST00000474589 881 ntBASIC18.11■□□□□ 0.49
CCDC188H7C350 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC188H7C350 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
CCDC188H7C350 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC188H7C350 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC188H7C350 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC188H7C350 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC188H7C350 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.11■□□□□ 0.49
CCDC188H7C350 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC188H7C350 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC188H7C350 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.11■□□□□ 0.49
CCDC188H7C350 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC188H7C350 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
CCDC188H7C350 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC188H7C350 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC188H7C350 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC18.11■□□□□ 0.49
CCDC188H7C350 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC188H7C350 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
CCDC188H7C350 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
CCDC188H7C350 CYP2T1P-202ENST00000641596 2535 ntBASIC18.1■□□□□ 0.49
CCDC188H7C350 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC188H7C350 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC188H7C350 AC092068.3-201ENST00000587894 2016 ntBASIC18.1■□□□□ 0.49
CCDC188H7C350 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.1■□□□□ 0.49
CCDC188H7C350 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC188H7C350 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
CCDC188H7C350 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC188H7C350 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 IGHGP-201ENST00000390555 1178 ntBASIC18.1■□□□□ 0.49
CCDC188H7C350 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 DENND3-207ENST00000518347 850 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC188H7C350 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.1■□□□□ 0.49
CCDC188H7C350 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC188H7C350 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
CCDC188H7C350 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC188H7C350 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC18.1■□□□□ 0.49
CCDC188H7C350 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 61.1 ms