Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 AL513303.2-201ENST00000413339 536 ntTSL 2 BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 AL512343.1-201ENST00000605837 169 ntBASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 PFAS-212ENST00000625942 396 ntTSL 5 BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TMEM88BA6NKF7 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TMEM88BA6NKF7 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TMEM88BA6NKF7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TMEM88BA6NKF7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TMEM88BA6NKF7 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TMEM88BA6NKF7 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC20.02■□□□□ 0.79
TMEM88BA6NKF7 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TMEM88BA6NKF7 AC087499.5-201ENST00000452760 1342 ntBASIC20.02■□□□□ 0.79
TMEM88BA6NKF7 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC20.02■□□□□ 0.79
TMEM88BA6NKF7 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 LINC02356-202ENST00000552663 314 ntTSL 3 BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 AC005412.3-201ENST00000580309 715 ntBASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 TMEM261P1-201ENST00000604899 340 ntBASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 MIR6787-201ENST00000616675 61 ntBASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 AC009949.1-201ENST00000623048 1830 ntBASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC20.01■□□□□ 0.79
TMEM88BA6NKF7 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM88BA6NKF7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM88BA6NKF7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20■□□□□ 0.79
TMEM88BA6NKF7 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20■□□□□ 0.79
TMEM88BA6NKF7 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM88BA6NKF7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC20■□□□□ 0.79
TMEM88BA6NKF7 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC20■□□□□ 0.79
TMEM88BA6NKF7 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC20■□□□□ 0.79
TMEM88BA6NKF7 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC20■□□□□ 0.79
TMEM88BA6NKF7 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC20■□□□□ 0.79
TMEM88BA6NKF7 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC20■□□□□ 0.79
TMEM88BA6NKF7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC20■□□□□ 0.79
TMEM88BA6NKF7 AC092933.1-201ENST00000393644 945 ntBASIC20■□□□□ 0.79
TMEM88BA6NKF7 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20■□□□□ 0.79
TMEM88BA6NKF7 BCYRN1-201ENST00000418539 200 ntBASIC20■□□□□ 0.79
TMEM88BA6NKF7 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC20■□□□□ 0.79
TMEM88BA6NKF7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC20■□□□□ 0.79
TMEM88BA6NKF7 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC20■□□□□ 0.79
TMEM88BA6NKF7 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20■□□□□ 0.79
TMEM88BA6NKF7 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
TMEM88BA6NKF7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC20■□□□□ 0.79
TMEM88BA6NKF7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM88BA6NKF7 AP005482.1-201ENST00000563722 1273 ntBASIC20■□□□□ 0.79
TMEM88BA6NKF7 RARRES2P9-201ENST00000565168 469 ntBASIC20■□□□□ 0.79
TMEM88BA6NKF7 MIR4538-201ENST00000581377 78 ntBASIC20■□□□□ 0.79
TMEM88BA6NKF7 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
TMEM88BA6NKF7 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM88BA6NKF7 COX11-210ENST00000639671 696 ntBASIC20■□□□□ 0.79
TMEM88BA6NKF7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM88BA6NKF7 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC20■□□□□ 0.79
TMEM88BA6NKF7 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20■□□□□ 0.79
TMEM88BA6NKF7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20■□□□□ 0.79
TMEM88BA6NKF7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM88BA6NKF7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20■□□□□ 0.79
TMEM88BA6NKF7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TMEM88BA6NKF7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20■□□□□ 0.79
TMEM88BA6NKF7 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 MPV17-208ENST00000405076 603 ntTSL 5 BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 GNAQP1-201ENST00000444815 1067 ntBASIC19.99■□□□□ 0.79
TMEM88BA6NKF7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms