Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC187A0A096LP49 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 WIZP1-201ENST00000531444 2299 ntBASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 CD99-202ENST00000381180 530 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 AC002056.1-201ENST00000395613 760 ntBASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 CBR1-202ENST00000399191 838 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 NMU-203ENST00000507338 658 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CCDC187A0A096LP49 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 BCRP1-201ENST00000444246 691 ntBASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 FAM86GP-201ENST00000448322 971 ntBASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 ACTL9-202ENST00000612068 1252 ntBASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 LINC00628-201ENST00000628516 1289 ntBASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CCDC187A0A096LP49 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 AL035633.1-201ENST00000406139 838 ntBASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 PAWRP1-201ENST00000451083 565 ntBASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 GATB-205ENST00000508611 605 ntTSL 2 BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.4■□□□□ 0.22
CCDC187A0A096LP49 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms