Protein–RNA interactions for Protein: Q9Y3C8

UFC1, Ubiquitin-fold modifier-conjugating enzyme 1, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UFC1Q9Y3C8 SDK1-210ENST00000615806 10258 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
UFC1Q9Y3C8 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
UFC1Q9Y3C8 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
UFC1Q9Y3C8 IL11-204ENST00000590625 1028 ntTSL 2 BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms