Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 AC241585.1-201ENST00000433527 519 ntBASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 AL161645.1-201ENST00000622716 1255 ntBASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ZC3H4Q9UPT8 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 AC005082.1-201ENST00000413042 2259 ntBASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 AC092580.3-201ENST00000430932 139 ntBASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 IGHV3-71-201ENST00000523324 359 ntBASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 AL606495.2-201ENST00000605867 535 ntBASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 AL161938.1-201ENST00000569833 2180 ntBASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
ZC3H4Q9UPT8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.95
ZC3H4Q9UPT8 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
ZC3H4Q9UPT8 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
ZC3H4Q9UPT8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 MRPS18AP1-201ENST00000414458 589 ntBASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 GATD1-206ENST00000526325 756 ntTSL 5 BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 LINC01225-203ENST00000563550 1244 ntBASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.95■□□□□ 0.94
ZC3H4Q9UPT8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 AC245100.3-201ENST00000441281 285 ntBASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 IGHV3-62-201ENST00000520057 340 ntBASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
ZC3H4Q9UPT8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
ZC3H4Q9UPT8 TDG-209ENST00000544861 1387 ntTSL 2 BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms