Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 AC027796.2-201ENST00000575326 344 ntBASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 MTDHP5-201ENST00000598980 586 ntBASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 MTDHP4-201ENST00000600287 670 ntBASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 AL355312.1-201ENST00000407115 2176 ntBASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 HARS-201ENST00000307633 1780 ntTSL 2 BASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 AC080080.1-201ENST00000625121 2420 ntBASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC22.47■■□□□ 1.19
PDZRN3Q9UPQ7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 BANP-227ENST00000626016 2144 ntTSL 2 BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
PDZRN3Q9UPQ7 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.19
PDZRN3Q9UPQ7 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC22.45■■□□□ 1.19
PDZRN3Q9UPQ7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.19
PDZRN3Q9UPQ7 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.19
PDZRN3Q9UPQ7 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 NKAPP1-205ENST00000585790 367 ntBASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 AC012313.1-201ENST00000593393 3059 ntBASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
PDZRN3Q9UPQ7 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 BEX3-201ENST00000361298 921 ntTSL 2 BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 RPS29-206ENST00000557111 488 ntTSL 2 BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 LINC02084-201ENST00000606069 1096 ntBASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 PGM5P2-202ENST00000637225 1043 ntBASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 AC134684.3-201ENST00000641758 218 ntBASIC22.44■■□□□ 1.18
PDZRN3Q9UPQ7 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms