Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.6■□□□□ 0.57
SIX4Q9UIU6 AC139713.2-201ENST00000641328 2723 ntBASIC18.6■□□□□ 0.57
SIX4Q9UIU6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIX4Q9UIU6 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC18.6■□□□□ 0.57
SIX4Q9UIU6 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SIX4Q9UIU6 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
SIX4Q9UIU6 AC116353.5-201ENST00000638148 1699 ntBASIC18.6■□□□□ 0.57
SIX4Q9UIU6 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SIX4Q9UIU6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 AP000347.1-202ENST00000435868 847 ntBASIC18.59■□□□□ 0.57
SIX4Q9UIU6 AC093909.1-201ENST00000504731 1122 ntBASIC18.59■□□□□ 0.57
SIX4Q9UIU6 AC136632.2-201ENST00000512891 861 ntBASIC18.59■□□□□ 0.57
SIX4Q9UIU6 SLC25A1P1-201ENST00000528351 927 ntBASIC18.59■□□□□ 0.57
SIX4Q9UIU6 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 WDR88-203ENST00000592765 651 ntTSL 5 BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 POC1A-203ENST00000474012 1760 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
SIX4Q9UIU6 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC18.58■□□□□ 0.57
SIX4Q9UIU6 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
SIX4Q9UIU6 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
SIX4Q9UIU6 GTPBP8-203ENST00000383678 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIX4Q9UIU6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
SIX4Q9UIU6 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SIX4Q9UIU6 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
SIX4Q9UIU6 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 GPR89P-201ENST00000407924 1495 ntBASIC18.58■□□□□ 0.56
SIX4Q9UIU6 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
SIX4Q9UIU6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 AC120114.3-201ENST00000611923 658 ntBASIC18.57■□□□□ 0.56
SIX4Q9UIU6 NME4-212ENST00000621774 904 ntTSL 3 BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC18.57■□□□□ 0.56
SIX4Q9UIU6 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms