Protein–RNA interactions for Protein: Q9NZR2

LRP1B, Low-density lipoprotein receptor-related protein 1B, humanhuman

Predictions only

Length 4,599 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1BQ9NZR2 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LRP1BQ9NZR2 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LRP1BQ9NZR2 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC10.95□□□□□ -0.66
LRP1BQ9NZR2 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
LRP1BQ9NZR2 RABEPK-201ENST00000259460 1313 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 POLE2-203ENST00000553805 496 ntTSL 2 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 SPDYE12P-201ENST00000618416 771 ntBASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 RN7SL692P-201ENST00000464677 288 ntBASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 AC009407.1-201ENST00000568958 598 ntBASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 HNRNPA1P40-201ENST00000426371 1278 ntBASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 NKG7-205ENST00000600427 520 ntTSL 3 BASIC10.94□□□□□ -0.66
LRP1BQ9NZR2 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 AC245100.3-201ENST00000441281 285 ntBASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 TNXA-203ENST00000507684 2038 ntBASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 AC140658.5-201ENST00000438532 169 ntBASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 AHSA1-202ENST00000535854 1173 ntTSL 2 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 TP53TG3HP-202ENST00000569755 579 ntBASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 EFTUD1P1-204ENST00000560401 1798 ntBASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 AC079776.1-201ENST00000401540 1152 ntBASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 AC100757.3-201ENST00000622361 1406 ntBASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 AC087289.5-201ENST00000586076 3175 ntBASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LRP1BQ9NZR2 DGCR5-201ENST00000399539 862 ntBASIC10.92□□□□□ -0.66
LRP1BQ9NZR2 ACA64.2-201ENST00000459014 129 ntBASIC10.92□□□□□ -0.66
LRP1BQ9NZR2 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC10.92□□□□□ -0.66
LRP1BQ9NZR2 FAM86C2P-203ENST00000528684 1004 ntBASIC10.92□□□□□ -0.66
LRP1BQ9NZR2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LRP1BQ9NZR2 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LRP1BQ9NZR2 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC10.92□□□□□ -0.66
LRP1BQ9NZR2 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms