Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 AL391005.1-201ENST00000623953 2435 ntBASIC17.21■□□□□ 0.35
MKS1Q9NXB0 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 AC007967.3-201ENST00000434308 558 ntBASIC17.21■□□□□ 0.35
MKS1Q9NXB0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.21■□□□□ 0.35
MKS1Q9NXB0 GCK-209ENST00000616242 2260 ntTSL 5 BASIC17.21■□□□□ 0.34
MKS1Q9NXB0 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.34
MKS1Q9NXB0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
MKS1Q9NXB0 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.2■□□□□ 0.34
MKS1Q9NXB0 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 AC122714.2-201ENST00000502787 707 ntBASIC17.2■□□□□ 0.34
MKS1Q9NXB0 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 AL390719.2-201ENST00000606993 987 ntBASIC17.2■□□□□ 0.34
MKS1Q9NXB0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 WT1-209ENST00000530998 2421 ntTSL 2 BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 AC092171.3-201ENST00000610122 2651 ntBASIC17.2■□□□□ 0.34
MKS1Q9NXB0 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
MKS1Q9NXB0 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.19■□□□□ 0.34
MKS1Q9NXB0 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 ZNF444P1-201ENST00000559497 298 ntBASIC17.19■□□□□ 0.34
MKS1Q9NXB0 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 AC140113.3-201ENST00000605663 199 ntBASIC17.19■□□□□ 0.34
MKS1Q9NXB0 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
MKS1Q9NXB0 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms