Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 ARMC10P1-201ENST00000313754 855 ntBASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 AL136038.3-201ENST00000561909 1096 ntBASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 AC024563.2-201ENST00000603282 481 ntBASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 AL445228.2-201ENST00000605589 952 ntBASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 DFFB-212ENST00000625756 649 ntTSL 5 BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
LIN7CQ9NUP9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
LIN7CQ9NUP9 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LIN7CQ9NUP9 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC14.52□□□□□ -0.08
LIN7CQ9NUP9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
LIN7CQ9NUP9 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.52□□□□□ -0.08
LIN7CQ9NUP9 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC14.52□□□□□ -0.08
LIN7CQ9NUP9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
LIN7CQ9NUP9 BX276092.7-203ENST00000637198 1536 ntBASIC14.52□□□□□ -0.08
LIN7CQ9NUP9 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.08
LIN7CQ9NUP9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
LIN7CQ9NUP9 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.52□□□□□ -0.08
LIN7CQ9NUP9 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC14.52□□□□□ -0.08
LIN7CQ9NUP9 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
LIN7CQ9NUP9 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC14.52□□□□□ -0.08
LIN7CQ9NUP9 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.52□□□□□ -0.08
LIN7CQ9NUP9 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 KRT18P48-201ENST00000434763 852 ntBASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.52□□□□□ -0.09
LIN7CQ9NUP9 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 MIR662-201ENST00000384847 95 ntBASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 AL645929.1-201ENST00000420084 975 ntBASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 VENTXP5-201ENST00000523979 775 ntBASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 LITAF-220ENST00000620789 692 ntTSL 5 BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LIN7CQ9NUP9 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms