Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC8.89□□□□□ -0.99
CDC42SE1Q9NRR8 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 MAPKBP1-215ENST00000514566 5394 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 ACER2-201ENST00000340967 2238 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 ERAP1-201ENST00000296754 5495 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 FAM213A-205ENST00000606162 5859 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 AC004448.1-201ENST00000458332 883 ntBASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 AC099521.3-201ENST00000624251 2938 ntBASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 SON-203ENST00000381679 7860 ntTSL 5 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC8.88□□□□□ -0.99
CDC42SE1Q9NRR8 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 TRIB1-201ENST00000311922 3635 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 FSTL3-206ENST00000592947 2144 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 AC011700.1-201ENST00000610409 2627 ntBASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 OTP-201ENST00000306422 3669 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 Z82170.1-201ENST00000625081 3192 ntBASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 AC005559.1-201ENST00000589661 871 ntBASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 AP002365.1-201ENST00000603448 772 ntBASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
CDC42SE1Q9NRR8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms