Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 TOB2P1-201ENST00000469761 992 ntBASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 KRT8P10-201ENST00000450021 1447 ntBASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.72■□□□□ 0.43
LRRC40Q9H9A6 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 AL353593.2-201ENST00000602529 1483 ntBASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 KRT17P6-201ENST00000453795 1220 ntBASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 MINOS1P3-201ENST00000457048 203 ntBASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 STK25P1-201ENST00000585406 838 ntBASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 IL11-204ENST00000590625 1028 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
LRRC40Q9H9A6 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
LRRC40Q9H9A6 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRRC40Q9H9A6 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRRC40Q9H9A6 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRRC40Q9H9A6 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRRC40Q9H9A6 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
LRRC40Q9H9A6 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 TP73-AS1-210ENST00000637775 1455 ntBASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 SPDEF-201ENST00000374037 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 ENSA-206ENST00000361631 725 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 CTNS-203ENST00000399306 803 ntTSL 3 BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 LINC00265-3P-201ENST00000447588 903 ntBASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 KRT18P35-201ENST00000510488 1269 ntBASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 AC069148.1-201ENST00000608741 768 ntBASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 AL358472.4-201ENST00000633140 710 ntBASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
LRRC40Q9H9A6 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms