Protein–RNA interactions for Protein: Q9H4B7

TUBB1, Tubulin beta-1 chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB1Q9H4B7 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
TUBB1Q9H4B7 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 AC078925.2-201ENST00000624013 1973 ntBASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 AL645929.1-201ENST00000420084 975 ntBASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 AC122714.2-201ENST00000502787 707 ntBASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 GUSBP12-201ENST00000513727 720 ntBASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 IGHV3-52-201ENST00000519770 353 ntBASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 AL592071.1-201ENST00000611956 408 ntBASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC16.8■□□□□ 0.28
TUBB1Q9H4B7 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 KRT8P10-201ENST00000450021 1447 ntBASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 TSPY22P-201ENST00000427496 604 ntBASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 HCG11-201ENST00000411553 5696 ntBASIC16.79■□□□□ 0.28
TUBB1Q9H4B7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 AC092171.3-201ENST00000610122 2651 ntBASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 AL671277.2-201ENST00000458060 996 ntBASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 AC022616.7-201ENST00000525383 220 ntBASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 PPOX-219ENST00000544598 813 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 AC124864.1-201ENST00000623408 392 ntBASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TUBB1Q9H4B7 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms