Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 FER1L4-210ENST00000615531 5998 ntBASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 DCAF12L2-201ENST00000360028 2599 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
POLR2J3Q9H1A7 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.14■□□□□ 0.18
POLR2J3Q9H1A7 TBC1D3P5-201ENST00000579401 1545 ntBASIC16.14■□□□□ 0.18
POLR2J3Q9H1A7 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 COPE-203ENST00000351079 907 ntTSL 2 BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 COX5BP2-201ENST00000392354 334 ntBASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 AL359075.1-203ENST00000462729 1002 ntBASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 P4HB-223ENST00000576390 439 ntTSL 4 BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 AL390719.2-201ENST00000606993 987 ntBASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 AC133561.5-201ENST00000635547 218 ntBASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 ADRB3-201ENST00000345060 2950 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
POLR2J3Q9H1A7 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 AC005332.3-201ENST00000589904 676 ntBASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 AC066615.1-201ENST00000640911 628 ntBASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
POLR2J3Q9H1A7 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 AC116353.5-201ENST00000638148 1699 ntBASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
POLR2J3Q9H1A7 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.12■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms