Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC22.43■■□□□ 1.18
PCDH11XQ9BZA7 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH11XQ9BZA7 BSG-215ENST00000618006 1329 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDH11XQ9BZA7 TRIM17-204ENST00000366698 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH11XQ9BZA7 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 HNRNPRP1-201ENST00000453465 1695 ntBASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 AC069335.1-201ENST00000489972 472 ntBASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 AL512356.2-201ENST00000546955 174 ntBASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 INO80E-210ENST00000567705 880 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 AC051619.7-201ENST00000568314 623 ntBASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 AC239800.4-201ENST00000603712 296 ntBASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 AKAP8P1-201ENST00000434743 1349 ntBASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH11XQ9BZA7 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 PMS2P4-201ENST00000412466 1052 ntBASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 TNXA-203ENST00000507684 2038 ntBASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 AC093214.1-201ENST00000511688 1107 ntBASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 NRK-203ENST00000536164 908 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 AC138761.1-201ENST00000584393 385 ntBASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH11XQ9BZA7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 FAM58DP-201ENST00000428076 619 ntBASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 GPS2P2-201ENST00000430745 888 ntBASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 RNA5SP421-201ENST00000516864 134 ntBASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 AP001059.3-201ENST00000619053 235 ntBASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 CLN3-246ENST00000636228 1224 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC22.4■■□□□ 1.18
PCDH11XQ9BZA7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDH11XQ9BZA7 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC22.39■■□□□ 1.18
PCDH11XQ9BZA7 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDH11XQ9BZA7 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDH11XQ9BZA7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC22.39■■□□□ 1.18
PCDH11XQ9BZA7 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC22.39■■□□□ 1.18
PCDH11XQ9BZA7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC22.39■■□□□ 1.18
PCDH11XQ9BZA7 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC22.39■■□□□ 1.18
PCDH11XQ9BZA7 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC22.39■■□□□ 1.18
PCDH11XQ9BZA7 CD7-202ENST00000578509 925 ntTSL 3 BASIC22.39■■□□□ 1.18
PCDH11XQ9BZA7 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PCDH11XQ9BZA7 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PCDH11XQ9BZA7 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
PCDH11XQ9BZA7 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.18
PCDH11XQ9BZA7 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PCDH11XQ9BZA7 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
PCDH11XQ9BZA7 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH11XQ9BZA7 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDH11XQ9BZA7 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC22.39■■□□□ 1.17
PCDH11XQ9BZA7 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
PCDH11XQ9BZA7 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
PCDH11XQ9BZA7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC22.39■■□□□ 1.17
PCDH11XQ9BZA7 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH11XQ9BZA7 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC22.39■■□□□ 1.17
PCDH11XQ9BZA7 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms