Protein–RNA interactions for Protein: Q9BY71

LRRC3, Leucine-rich repeat-containing protein 3, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC3Q9BY71 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
LRRC3Q9BY71 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.14■□□□□ 0.5
LRRC3Q9BY71 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
LRRC3Q9BY71 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
LRRC3Q9BY71 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 AC211486.1-202ENST00000416371 468 ntBASIC18.14■□□□□ 0.49
LRRC3Q9BY71 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 AC211476.1-201ENST00000503899 468 ntBASIC18.14■□□□□ 0.49
LRRC3Q9BY71 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 AC096734.2-201ENST00000562054 433 ntBASIC18.14■□□□□ 0.49
LRRC3Q9BY71 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 C20orf181-201ENST00000623918 480 ntBASIC18.14■□□□□ 0.49
LRRC3Q9BY71 RAI2-203ENST00000415486 2037 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 SLC35G6-201ENST00000412468 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LRRC3Q9BY71 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 NOC2LP1-202ENST00000452600 2235 ntBASIC18.13■□□□□ 0.49
LRRC3Q9BY71 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LRRC3Q9BY71 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 ANGPTL4-202ENST00000393962 1705 ntTSL 5 BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LRRC3Q9BY71 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms