Protein–RNA interactions for Protein: Q9BY41

HDAC8, Histone deacetylase 8, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8Q9BY41 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
HDAC8Q9BY41 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC8Q9BY41 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HDAC8Q9BY41 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HDAC8Q9BY41 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.26■□□□□ 0.35
HDAC8Q9BY41 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
HDAC8Q9BY41 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 UPF3AP3-201ENST00000420996 769 ntBASIC17.25■□□□□ 0.35
HDAC8Q9BY41 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 POLD4-207ENST00000531239 584 ntTSL 2 BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 AC096734.2-201ENST00000562054 433 ntBASIC17.25■□□□□ 0.35
HDAC8Q9BY41 COX5A-206ENST00000568783 571 ntTSL 3 BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 MTDHP5-201ENST00000598980 586 ntBASIC17.25■□□□□ 0.35
HDAC8Q9BY41 HOTTIP_1.1-201ENST00000620415 57 ntBASIC17.25■□□□□ 0.35
HDAC8Q9BY41 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HDAC8Q9BY41 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 RPSAP43-201ENST00000402237 625 ntBASIC17.24■□□□□ 0.35
HDAC8Q9BY41 MCCD1P2-201ENST00000423228 335 ntBASIC17.24■□□□□ 0.35
HDAC8Q9BY41 GPX1P2-201ENST00000429271 606 ntBASIC17.24■□□□□ 0.35
HDAC8Q9BY41 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 MIR3687-2-201ENST00000577708 61 ntBASIC17.24■□□□□ 0.35
HDAC8Q9BY41 MIR3687-1-201ENST00000614492 61 ntBASIC17.24■□□□□ 0.35
HDAC8Q9BY41 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HDAC8Q9BY41 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 PDE4D-204ENST00000358923 2969 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
HDAC8Q9BY41 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 RHOQP3-201ENST00000437982 621 ntBASIC17.22■□□□□ 0.35
HDAC8Q9BY41 FIS1-203ENST00000442303 631 ntTSL 3 BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 AC018845.2-201ENST00000568326 409 ntBASIC17.22■□□□□ 0.35
HDAC8Q9BY41 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
HDAC8Q9BY41 AC010327.4-202ENST00000591484 748 ntBASIC17.22■□□□□ 0.35
HDAC8Q9BY41 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms