Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 MIR3180-4-201ENST00000582223 153 ntBASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 DGCR10-201ENST00000609839 495 ntBASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 AL662844.4-201ENST00000606367 2838 ntBASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 AC007950.2-201ENST00000615045 2347 ntBASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
SSBP4Q9BWG4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 YIPF7-202ENST00000415895 1196 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 CHST3-201ENST00000373115 6970 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC13.21□□□□□ -0.29
SSBP4Q9BWG4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP4Q9BWG4 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP4Q9BWG4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC13.21□□□□□ -0.3
SSBP4Q9BWG4 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP4Q9BWG4 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP4Q9BWG4 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.21□□□□□ -0.3
SSBP4Q9BWG4 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC13.21□□□□□ -0.3
SSBP4Q9BWG4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
SSBP4Q9BWG4 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP4Q9BWG4 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
SSBP4Q9BWG4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
SSBP4Q9BWG4 AL024508.2-201ENST00000607749 1894 ntBASIC13.21□□□□□ -0.3
SSBP4Q9BWG4 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
SSBP4Q9BWG4 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 AC006449.5-201ENST00000610658 2098 ntBASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
SSBP4Q9BWG4 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms