Protein–RNA interactions for Protein: Q96SM3

CPXM1, Probable carboxypeptidase X1, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPXM1Q96SM3 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPXM1Q96SM3 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.33■□□□□ 0.53
CPXM1Q96SM3 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPXM1Q96SM3 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPXM1Q96SM3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPXM1Q96SM3 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC18.33■□□□□ 0.53
CPXM1Q96SM3 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPXM1Q96SM3 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CPXM1Q96SM3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CPXM1Q96SM3 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 AF238378.1-201ENST00000526806 358 ntBASIC18.33■□□□□ 0.52
CPXM1Q96SM3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 AL355877.3-201ENST00000622820 899 ntBASIC18.33■□□□□ 0.52
CPXM1Q96SM3 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 MFGE8-201ENST00000268150 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC18.33■□□□□ 0.52
CPXM1Q96SM3 AC080080.1-201ENST00000625121 2420 ntBASIC18.32■□□□□ 0.52
CPXM1Q96SM3 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 SAPCD2P3-201ENST00000455031 850 ntBASIC18.32■□□□□ 0.52
CPXM1Q96SM3 FGFR3P6-201ENST00000457012 610 ntBASIC18.32■□□□□ 0.52
CPXM1Q96SM3 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 COPE-211ENST00000600932 1144 ntTSL 5 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 AC008608.2-201ENST00000606089 416 ntBASIC18.32■□□□□ 0.52
CPXM1Q96SM3 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 CLDN4-201ENST00000340958 1831 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 AC093525.9-201ENST00000624961 1746 ntBASIC18.32■□□□□ 0.52
CPXM1Q96SM3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
CPXM1Q96SM3 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC18.31■□□□□ 0.52
CPXM1Q96SM3 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPXM1Q96SM3 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CPXM1Q96SM3 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPXM1Q96SM3 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPXM1Q96SM3 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPXM1Q96SM3 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CPXM1Q96SM3 SIGLEC30P-201ENST00000455569 941 ntBASIC18.31■□□□□ 0.52
CPXM1Q96SM3 BX005266.1-201ENST00000473402 457 ntBASIC18.31■□□□□ 0.52
CPXM1Q96SM3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC18.31■□□□□ 0.52
CPXM1Q96SM3 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC18.31■□□□□ 0.52
CPXM1Q96SM3 CYB561-217ENST00000582997 877 ntTSL 5 BASIC18.31■□□□□ 0.52
CPXM1Q96SM3 NKAPP1-205ENST00000585790 367 ntBASIC18.31■□□□□ 0.52
CPXM1Q96SM3 LINC01711-201ENST00000598340 967 ntBASIC18.31■□□□□ 0.52
CPXM1Q96SM3 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CPXM1Q96SM3 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPXM1Q96SM3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC18.31■□□□□ 0.52
CPXM1Q96SM3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPXM1Q96SM3 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPXM1Q96SM3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPXM1Q96SM3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CPXM1Q96SM3 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CPXM1Q96SM3 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPXM1Q96SM3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPXM1Q96SM3 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPXM1Q96SM3 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPXM1Q96SM3 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPXM1Q96SM3 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.3■□□□□ 0.52
CPXM1Q96SM3 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC18.3■□□□□ 0.52
CPXM1Q96SM3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CPXM1Q96SM3 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC18.3■□□□□ 0.52
CPXM1Q96SM3 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CPXM1Q96SM3 AL356309.3-201ENST00000624132 1934 ntBASIC18.3■□□□□ 0.52
CPXM1Q96SM3 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CPXM1Q96SM3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms