Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP54Q96N23 AL138828.2-201ENST00000615812 383 ntBASIC16.93■□□□□ 0.3
CFAP54Q96N23 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP54Q96N23 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP54Q96N23 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP54Q96N23 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.93■□□□□ 0.3
CFAP54Q96N23 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP54Q96N23 MIR6869-201ENST00000619434 62 ntBASIC16.93■□□□□ 0.3
CFAP54Q96N23 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP54Q96N23 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP54Q96N23 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP54Q96N23 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP54Q96N23 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP54Q96N23 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CFAP54Q96N23 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC16.93■□□□□ 0.3
CFAP54Q96N23 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP54Q96N23 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.92■□□□□ 0.3
CFAP54Q96N23 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.92■□□□□ 0.3
CFAP54Q96N23 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP54Q96N23 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.92■□□□□ 0.3
CFAP54Q96N23 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CFAP54Q96N23 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CFAP54Q96N23 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.92■□□□□ 0.3
CFAP54Q96N23 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP54Q96N23 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP54Q96N23 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP54Q96N23 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC16.92■□□□□ 0.3
CFAP54Q96N23 AC009407.1-201ENST00000568958 598 ntBASIC16.92■□□□□ 0.3
CFAP54Q96N23 ACTL9-202ENST00000612068 1252 ntBASIC16.92■□□□□ 0.3
CFAP54Q96N23 GGTLC5P-201ENST00000617623 998 ntBASIC16.92■□□□□ 0.3
CFAP54Q96N23 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP54Q96N23 FUT8-AS1-201ENST00000621019 1521 ntBASIC16.92■□□□□ 0.3
CFAP54Q96N23 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC16.92■□□□□ 0.3
CFAP54Q96N23 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP54Q96N23 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
CFAP54Q96N23 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP54Q96N23 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP54Q96N23 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.92■□□□□ 0.3
CFAP54Q96N23 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP54Q96N23 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP54Q96N23 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.92■□□□□ 0.3
CFAP54Q96N23 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC16.92■□□□□ 0.3
CFAP54Q96N23 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CFAP54Q96N23 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.92■□□□□ 0.3
CFAP54Q96N23 AC100803.2-201ENST00000562459 1963 ntBASIC16.92■□□□□ 0.3
CFAP54Q96N23 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.92■□□□□ 0.3
CFAP54Q96N23 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC16.92■□□□□ 0.3
CFAP54Q96N23 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
CFAP54Q96N23 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CFAP54Q96N23 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.91■□□□□ 0.3
CFAP54Q96N23 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.91■□□□□ 0.3
CFAP54Q96N23 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CFAP54Q96N23 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CFAP54Q96N23 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CFAP54Q96N23 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CFAP54Q96N23 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
CFAP54Q96N23 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.91■□□□□ 0.3
CFAP54Q96N23 AC007541.1-201ENST00000570282 1469 ntBASIC16.91■□□□□ 0.3
CFAP54Q96N23 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CFAP54Q96N23 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CFAP54Q96N23 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.91■□□□□ 0.3
CFAP54Q96N23 AL671277.1-201ENST00000429656 993 ntBASIC16.91■□□□□ 0.3
CFAP54Q96N23 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
CFAP54Q96N23 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
CFAP54Q96N23 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP54Q96N23 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CFAP54Q96N23 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP54Q96N23 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP54Q96N23 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
CFAP54Q96N23 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.9■□□□□ 0.3
CFAP54Q96N23 CXCL1P1-201ENST00000502804 216 ntBASIC16.9■□□□□ 0.3
CFAP54Q96N23 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.9■□□□□ 0.3
CFAP54Q96N23 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC16.9■□□□□ 0.3
CFAP54Q96N23 FUZ-207ENST00000526575 482 ntTSL 4 BASIC16.9■□□□□ 0.3
CFAP54Q96N23 AC104794.3-201ENST00000566840 1248 ntBASIC16.9■□□□□ 0.3
CFAP54Q96N23 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP54Q96N23 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP54Q96N23 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP54Q96N23 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CFAP54Q96N23 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.9■□□□□ 0.3
CFAP54Q96N23 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CFAP54Q96N23 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CFAP54Q96N23 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms