Protein–RNA interactions for Protein: Q96LX7

CCDC17, Coiled-coil domain-containing protein 17, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17Q96LX7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC17Q96LX7 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC17Q96LX7 AC008764.6-201ENST00000595909 2069 ntBASIC20.25■□□□□ 0.83
CCDC17Q96LX7 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCDC17Q96LX7 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC17Q96LX7 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC17Q96LX7 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC17Q96LX7 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC17Q96LX7 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC17Q96LX7 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC17Q96LX7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC17Q96LX7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC20.25■□□□□ 0.83
CCDC17Q96LX7 AC010507.1-201ENST00000633895 436 ntBASIC20.25■□□□□ 0.83
CCDC17Q96LX7 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC17Q96LX7 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC17Q96LX7 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CCDC17Q96LX7 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC17Q96LX7 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.25■□□□□ 0.83
CCDC17Q96LX7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC17Q96LX7 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CCDC17Q96LX7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 DHDH-204ENST00000523250 634 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 AQP6-205ENST00000618286 829 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 NOC2LP1-202ENST00000452600 2235 ntBASIC20.24■□□□□ 0.83
CCDC17Q96LX7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC20.24■□□□□ 0.83
CCDC17Q96LX7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 CD99L2-206ENST00000466436 988 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 AL691403.2-201ENST00000618460 490 ntBASIC20.23■□□□□ 0.83
CCDC17Q96LX7 AC004877.2-201ENST00000623941 599 ntBASIC20.23■□□□□ 0.83
CCDC17Q96LX7 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 PC-214ENST00000628663 1470 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC20.23■□□□□ 0.83
CCDC17Q96LX7 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 CXCL1P1-201ENST00000502804 216 ntBASIC20.22■□□□□ 0.83
CCDC17Q96LX7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 AL513190.1-201ENST00000621254 727 ntBASIC20.22■□□□□ 0.83
CCDC17Q96LX7 AC007064.4-201ENST00000637740 555 ntBASIC20.22■□□□□ 0.83
CCDC17Q96LX7 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CCDC17Q96LX7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms