Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
PDLIM5Q96HC4 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 NPRL2-201ENST00000232501 1700 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 MIR1224-201ENST00000408193 85 ntBASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 AC092119.3-201ENST00000612618 583 ntBASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
PDLIM5Q96HC4 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
PDLIM5Q96HC4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.02■□□□□ 0.31
PDLIM5Q96HC4 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDLIM5Q96HC4 SIGLEC16-201ENST00000599858 1437 ntBASIC17.02■□□□□ 0.31
PDLIM5Q96HC4 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDLIM5Q96HC4 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDLIM5Q96HC4 EGFEM1P-202ENST00000431685 1563 ntBASIC17.02■□□□□ 0.31
PDLIM5Q96HC4 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PDLIM5Q96HC4 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
PDLIM5Q96HC4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
PDLIM5Q96HC4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
PDLIM5Q96HC4 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 ABCD1P5-201ENST00000445663 754 ntBASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 KRT16P4-201ENST00000453883 522 ntBASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.01■□□□□ 0.31
PDLIM5Q96HC4 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM5Q96HC4 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC17■□□□□ 0.31
PDLIM5Q96HC4 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDLIM5Q96HC4 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM5Q96HC4 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17■□□□□ 0.31
PDLIM5Q96HC4 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM5Q96HC4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM5Q96HC4 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM5Q96HC4 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC17■□□□□ 0.31
PDLIM5Q96HC4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM5Q96HC4 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17■□□□□ 0.31
PDLIM5Q96HC4 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PDLIM5Q96HC4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM5Q96HC4 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM5Q96HC4 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM5Q96HC4 AC060834.1-201ENST00000443027 2032 ntBASIC17■□□□□ 0.31
PDLIM5Q96HC4 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC17■□□□□ 0.31
PDLIM5Q96HC4 FICD-205ENST00000552758 603 ntTSL 2 BASIC17■□□□□ 0.31
PDLIM5Q96HC4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC17■□□□□ 0.31
PDLIM5Q96HC4 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC17■□□□□ 0.31
PDLIM5Q96HC4 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
PDLIM5Q96HC4 AC099336.1-202ENST00000602961 463 ntBASIC17■□□□□ 0.31
PDLIM5Q96HC4 AC073592.4-201ENST00000623827 446 ntBASIC17■□□□□ 0.31
PDLIM5Q96HC4 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM5Q96HC4 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC17■□□□□ 0.31
PDLIM5Q96HC4 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM5Q96HC4 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PDLIM5Q96HC4 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PDLIM5Q96HC4 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC17■□□□□ 0.31
PDLIM5Q96HC4 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC17■□□□□ 0.31
PDLIM5Q96HC4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
PDLIM5Q96HC4 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PDLIM5Q96HC4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms