Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.77■□□□□ 0.44
RTP4Q96DX8 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTP4Q96DX8 AC084018.2-201ENST00000613093 2607 ntBASIC17.77■□□□□ 0.43
RTP4Q96DX8 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTP4Q96DX8 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTP4Q96DX8 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RTP4Q96DX8 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RTP4Q96DX8 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RTP4Q96DX8 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.77■□□□□ 0.43
RTP4Q96DX8 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.76■□□□□ 0.43
RTP4Q96DX8 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.76■□□□□ 0.43
RTP4Q96DX8 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RTP4Q96DX8 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RTP4Q96DX8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.76■□□□□ 0.43
RTP4Q96DX8 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.76■□□□□ 0.43
RTP4Q96DX8 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC17.76■□□□□ 0.43
RTP4Q96DX8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC17.76■□□□□ 0.43
RTP4Q96DX8 MIR3652-201ENST00000579335 131 ntBASIC17.76■□□□□ 0.43
RTP4Q96DX8 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.76■□□□□ 0.43
RTP4Q96DX8 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RTP4Q96DX8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RTP4Q96DX8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RTP4Q96DX8 TP73-AS1-210ENST00000637775 1455 ntBASIC17.75■□□□□ 0.43
RTP4Q96DX8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 STK19B-204ENST00000512515 211 ntBASIC17.75■□□□□ 0.43
RTP4Q96DX8 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 CIB2-208ENST00000560618 804 ntTSL 2 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RTP4Q96DX8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RTP4Q96DX8 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTP4Q96DX8 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.74■□□□□ 0.43
RTP4Q96DX8 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC17.74■□□□□ 0.43
RTP4Q96DX8 INTS4P1-201ENST00000438455 1935 ntBASIC17.74■□□□□ 0.43
RTP4Q96DX8 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RTP4Q96DX8 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.74■□□□□ 0.43
RTP4Q96DX8 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.74■□□□□ 0.43
RTP4Q96DX8 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.74■□□□□ 0.43
RTP4Q96DX8 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RTP4Q96DX8 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms