Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 TSPY12P-201ENST00000421279 868 ntBASIC16.79■□□□□ 0.28
VPS33AQ96AX1 AC005104.2-201ENST00000427818 678 ntBASIC16.79■□□□□ 0.28
VPS33AQ96AX1 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 TMA16-209ENST00000513272 803 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 AL136038.4-201ENST00000603606 1261 ntBASIC16.79■□□□□ 0.28
VPS33AQ96AX1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 AL391005.1-201ENST00000623953 2435 ntBASIC16.79■□□□□ 0.28
VPS33AQ96AX1 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 F12-201ENST00000253496 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
VPS33AQ96AX1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 AC046185.3-201ENST00000623228 1824 ntBASIC16.78■□□□□ 0.28
VPS33AQ96AX1 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 AC079328.2-201ENST00000561241 3354 ntBASIC16.78■□□□□ 0.28
VPS33AQ96AX1 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
VPS33AQ96AX1 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 KCNMA1-201ENST00000286627 6194 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 SOD2-215ENST00000546087 2558 ntTSL 2 BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 AL138966.2-201ENST00000621997 464 ntBASIC16.77■□□□□ 0.28
VPS33AQ96AX1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
VPS33AQ96AX1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms