Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNED1Q8TER0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNED1Q8TER0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNED1Q8TER0 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNED1Q8TER0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC21.02■□□□□ 0.96
SNED1Q8TER0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNED1Q8TER0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNED1Q8TER0 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC21.02■□□□□ 0.96
SNED1Q8TER0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.02■□□□□ 0.96
SNED1Q8TER0 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SNED1Q8TER0 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SNED1Q8TER0 VMA21-202ENST00000370361 693 ntTSL 5 BASIC21.02■□□□□ 0.96
SNED1Q8TER0 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC21.02■□□□□ 0.96
SNED1Q8TER0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC21.02■□□□□ 0.96
SNED1Q8TER0 TERF1P3-201ENST00000505638 1227 ntBASIC21.02■□□□□ 0.96
SNED1Q8TER0 AC140878.1-201ENST00000565277 250 ntBASIC21.02■□□□□ 0.96
SNED1Q8TER0 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC21.02■□□□□ 0.96
SNED1Q8TER0 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SNED1Q8TER0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SNED1Q8TER0 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
SNED1Q8TER0 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC21.02■□□□□ 0.95
SNED1Q8TER0 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
SNED1Q8TER0 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
SNED1Q8TER0 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC21.02■□□□□ 0.95
SNED1Q8TER0 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNED1Q8TER0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SNED1Q8TER0 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC21.01■□□□□ 0.95
SNED1Q8TER0 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNED1Q8TER0 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNED1Q8TER0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNED1Q8TER0 NODAL-201ENST00000287139 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNED1Q8TER0 AP000997.3-201ENST00000623333 2250 ntBASIC21.01■□□□□ 0.95
SNED1Q8TER0 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SNED1Q8TER0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SNED1Q8TER0 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNED1Q8TER0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SNED1Q8TER0 MIR943-201ENST00000401286 94 ntBASIC21.01■□□□□ 0.95
SNED1Q8TER0 RAC2-204ENST00000406508 893 ntTSL 5 BASIC21.01■□□□□ 0.95
SNED1Q8TER0 AC107890.1-201ENST00000422478 521 ntBASIC21.01■□□□□ 0.95
SNED1Q8TER0 GAPDHP21-201ENST00000450301 1010 ntBASIC21.01■□□□□ 0.95
SNED1Q8TER0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNED1Q8TER0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC21.01■□□□□ 0.95
SNED1Q8TER0 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC21.01■□□□□ 0.95
SNED1Q8TER0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNED1Q8TER0 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC21.01■□□□□ 0.95
SNED1Q8TER0 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNED1Q8TER0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNED1Q8TER0 FO538757.1-201ENST00000623083 1397 ntBASIC21.01■□□□□ 0.95
SNED1Q8TER0 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNED1Q8TER0 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SNED1Q8TER0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNED1Q8TER0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SNED1Q8TER0 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SNED1Q8TER0 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC21■□□□□ 0.95
SNED1Q8TER0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SNED1Q8TER0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SNED1Q8TER0 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC21■□□□□ 0.95
SNED1Q8TER0 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC21■□□□□ 0.95
SNED1Q8TER0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SNED1Q8TER0 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21■□□□□ 0.95
SNED1Q8TER0 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNED1Q8TER0 BASP1P1-201ENST00000430708 665 ntBASIC21■□□□□ 0.95
SNED1Q8TER0 TSPY16P-201ENST00000449843 468 ntBASIC21■□□□□ 0.95
SNED1Q8TER0 INGX-202ENST00000489074 768 ntBASIC21■□□□□ 0.95
SNED1Q8TER0 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SNED1Q8TER0 DUX4L17-201ENST00000557360 1267 ntBASIC21■□□□□ 0.95
SNED1Q8TER0 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC21■□□□□ 0.95
SNED1Q8TER0 AC008761.3-201ENST00000624803 892 ntBASIC21■□□□□ 0.95
SNED1Q8TER0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SNED1Q8TER0 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC21■□□□□ 0.95
SNED1Q8TER0 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SNED1Q8TER0 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SNED1Q8TER0 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SNED1Q8TER0 REXO1L9P-201ENST00000604264 2108 ntBASIC21■□□□□ 0.95
SNED1Q8TER0 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
SNED1Q8TER0 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNED1Q8TER0 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNED1Q8TER0 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNED1Q8TER0 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNED1Q8TER0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNED1Q8TER0 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNED1Q8TER0 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNED1Q8TER0 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC20.99■□□□□ 0.95
SNED1Q8TER0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SNED1Q8TER0 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNED1Q8TER0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SNED1Q8TER0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.99■□□□□ 0.95
SNED1Q8TER0 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC20.99■□□□□ 0.95
SNED1Q8TER0 AC125807.1-201ENST00000483097 614 ntBASIC20.99■□□□□ 0.95
SNED1Q8TER0 MEIS3P1-201ENST00000495167 958 ntBASIC20.99■□□□□ 0.95
SNED1Q8TER0 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SNED1Q8TER0 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC20.99■□□□□ 0.95
SNED1Q8TER0 KRT18P55-202ENST00000578578 1546 ntBASIC20.99■□□□□ 0.95
SNED1Q8TER0 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC20.99■□□□□ 0.95
SNED1Q8TER0 AL158211.3-201ENST00000607385 239 ntBASIC20.99■□□□□ 0.95
SNED1Q8TER0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC20.99■□□□□ 0.95
SNED1Q8TER0 GYG1-214ENST00000627418 1831 ntTSL 5 BASIC20.99■□□□□ 0.95
SNED1Q8TER0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SNED1Q8TER0 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SNED1Q8TER0 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms