Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH19Q8TAB3 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH19Q8TAB3 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDH19Q8TAB3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH19Q8TAB3 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDH19Q8TAB3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH19Q8TAB3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH19Q8TAB3 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH19Q8TAB3 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH19Q8TAB3 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH19Q8TAB3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
PCDH19Q8TAB3 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH19Q8TAB3 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
PCDH19Q8TAB3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC18■□□□□ 0.47
PCDH19Q8TAB3 AC009336.1-201ENST00000608941 1553 ntBASIC18■□□□□ 0.47
PCDH19Q8TAB3 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 AC093525.9-201ENST00000624961 1746 ntBASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 STK19B-204ENST00000512515 211 ntBASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 PNN-202ENST00000553331 656 ntTSL 3 BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 AC073592.5-201ENST00000624854 528 ntBASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 PPT2-246ENST00000375137 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 PMPCAP1-201ENST00000508114 1576 ntBASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PCDH19Q8TAB3 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 PRORSD1P-202ENST00000563365 2154 ntBASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 AC003669.1-201ENST00000334569 611 ntBASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 NKTR-203ENST00000442970 646 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 MIR5100-201ENST00000579544 119 ntBASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 AP000867.4-201ENST00000641616 219 ntBASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.98■□□□□ 0.47
PCDH19Q8TAB3 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH19Q8TAB3 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
PCDH19Q8TAB3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PCDH19Q8TAB3 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.97■□□□□ 0.47
PCDH19Q8TAB3 AL135999.2-201ENST00000622438 1686 ntBASIC17.97■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms