Protein–RNA interactions for Protein: Q8NF37

LPCAT1, Lysophosphatidylcholine acyltransferase 1, humanhuman

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1Q8NF37 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.61■□□□□ 0.41
LPCAT1Q8NF37 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
LPCAT1Q8NF37 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT1Q8NF37 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.61■□□□□ 0.41
LPCAT1Q8NF37 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.61■□□□□ 0.41
LPCAT1Q8NF37 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT1Q8NF37 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT1Q8NF37 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LPCAT1Q8NF37 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 BOC-212ENST00000485230 2173 ntTSL 2 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 SAPCD2P3-201ENST00000455031 850 ntBASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 COX5A-202ENST00000562233 441 ntTSL 3 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 MTDHP3-201ENST00000594186 672 ntBASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 SLC7A9-202ENST00000587772 1568 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 AC046185.3-201ENST00000623228 1824 ntBASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LPCAT1Q8NF37 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 AC009336.1-201ENST00000608941 1553 ntBASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 RBM17P3-201ENST00000417687 1192 ntBASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 EMBP1-201ENST00000458200 901 ntBASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
LPCAT1Q8NF37 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
LPCAT1Q8NF37 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LPCAT1Q8NF37 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
LPCAT1Q8NF37 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LPCAT1Q8NF37 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC17.58■□□□□ 0.41
LPCAT1Q8NF37 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
LPCAT1Q8NF37 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LPCAT1Q8NF37 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
LPCAT1Q8NF37 AC009779.2-201ENST00000552576 1443 ntTSL 4 BASIC17.58■□□□□ 0.41
LPCAT1Q8NF37 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LPCAT1Q8NF37 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LPCAT1Q8NF37 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.58■□□□□ 0.4
LPCAT1Q8NF37 SPDYE21P-201ENST00000413323 827 ntBASIC17.58■□□□□ 0.4
LPCAT1Q8NF37 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.58■□□□□ 0.4
LPCAT1Q8NF37 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.58■□□□□ 0.4
LPCAT1Q8NF37 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms