Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
SIMC1Q8NDZ2 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 PC-208ENST00000529047 1607 ntTSL 3 BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 AC108860.2-201ENST00000562760 2183 ntBASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 RCN1P2-201ENST00000398357 915 ntBASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 HCG4P8-203ENST00000443049 980 ntBASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
SIMC1Q8NDZ2 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
SIMC1Q8NDZ2 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.46■□□□□ 0.22
SIMC1Q8NDZ2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.22
SIMC1Q8NDZ2 OR6D1P-202ENST00000641007 5290 ntBASIC16.46■□□□□ 0.22
SIMC1Q8NDZ2 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 MINOS1P3-201ENST00000457048 203 ntBASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 VENTXP7-201ENST00000475503 772 ntBASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 AC104819.1-201ENST00000504587 486 ntBASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 AC096582.2-201ENST00000510860 516 ntBASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 AC099336.1-202ENST00000602961 463 ntBASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 AC019129.2-201ENST00000609837 1235 ntBASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
SIMC1Q8NDZ2 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SIMC1Q8NDZ2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms