Protein–RNA interactions for Protein: Q8N3S3

PHTF2, Putative homeodomain transcription factor 2, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2Q8N3S3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 MED15P5-201ENST00000423150 992 ntBASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 SLC25A6P5-201ENST00000435663 894 ntBASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 SIRPAP1-201ENST00000448467 1770 ntBASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC18.03■□□□□ 0.48
PHTF2Q8N3S3 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 BRCC3-202ENST00000340647 1101 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 AL591424.1-201ENST00000442569 1213 ntBASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 AC009947.1-201ENST00000444350 727 ntBASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 ETFA-208ENST00000559602 792 ntTSL 3 BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.02■□□□□ 0.48
PHTF2Q8N3S3 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC18.02■□□□□ 0.47
PHTF2Q8N3S3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PHTF2Q8N3S3 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PHTF2Q8N3S3 AC132938.5-201ENST00000624980 1813 ntBASIC18.02■□□□□ 0.47
PHTF2Q8N3S3 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PHTF2Q8N3S3 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PHTF2Q8N3S3 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PHTF2Q8N3S3 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 IMP4-203ENST00000409935 958 ntTSL 5 BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 AC019129.2-201ENST00000609837 1235 ntBASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 AC079416.2-201ENST00000625035 1193 ntBASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 AL645608.8-201ENST00000606034 2086 ntBASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 AC080080.1-201ENST00000625121 2420 ntBASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PHTF2Q8N3S3 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms