Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.14■□□□□ 0.34
TRIM48Q8IWZ4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.14■□□□□ 0.34
TRIM48Q8IWZ4 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.34
TRIM48Q8IWZ4 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 RAB17-203ENST00000409576 466 ntTSL 3 BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 AC021087.4-201ENST00000563761 564 ntBASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 AC109462.3-201ENST00000573934 613 ntBASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 NKAPP1-205ENST00000585790 367 ntBASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 Z94160.2-201ENST00000609322 910 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 AD001527.2-201ENST00000622994 785 ntBASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 HLA-A-201ENST00000376802 1334 ntBASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 PMPCAP1-201ENST00000508114 1576 ntBASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
TRIM48Q8IWZ4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 KLF4P1-201ENST00000412782 1185 ntBASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 BX005266.1-201ENST00000473402 457 ntBASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 AC148477.8-201ENST00000624298 468 ntBASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 AC079776.2-201ENST00000641154 1609 ntBASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.13■□□□□ 0.33
TRIM48Q8IWZ4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 AC018712.1-201ENST00000455767 687 ntBASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 MTDHP4-201ENST00000600287 670 ntBASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 AC120114.3-201ENST00000611923 658 ntBASIC17.12■□□□□ 0.33
TRIM48Q8IWZ4 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms