Protein–RNA interactions for Protein: Q8IVM7

LINC00346, Putative uncharacterized protein encoded by LINC00346, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346Q8IVM7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
LINC00346Q8IVM7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC15.46■□□□□ 0.06
LINC00346Q8IVM7 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.46■□□□□ 0.06
LINC00346Q8IVM7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LINC00346Q8IVM7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
LINC00346Q8IVM7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LINC00346Q8IVM7 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
LINC00346Q8IVM7 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.46■□□□□ 0.06
LINC00346Q8IVM7 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
LINC00346Q8IVM7 ECSIT-202ENST00000270517 1700 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
LINC00346Q8IVM7 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 AC125634.1-201ENST00000438758 1403 ntBASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 AC002558.1-201ENST00000488906 803 ntBASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 AC109462.3-201ENST00000573934 613 ntBASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 AC090616.6-201ENST00000582640 721 ntBASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 AMT-250ENST00000637682 1823 ntTSL 5 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
LINC00346Q8IVM7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 AC005332.1-201ENST00000577698 1310 ntBASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 TK1-204ENST00000590430 683 ntTSL 3 BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 AL121956.5-201ENST00000625261 221 ntBASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
LINC00346Q8IVM7 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC15.43■□□□□ 0.06
LINC00346Q8IVM7 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms