Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 ABR-217ENST00000572441 563 ntTSL 4 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 BNIP3P18-201ENST00000593976 575 ntBASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 TMEM59L-205ENST00000600490 1717 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 PLCB3-204ENST00000540288 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
NHLRC1Q6VVB1 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 LYSMD4-203ENST00000378904 2122 ntBASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 AC069148.1-201ENST00000608741 768 ntBASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 AC011270.2-201ENST00000624293 2550 ntBASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
NHLRC1Q6VVB1 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 NSUN5P1-202ENST00000421140 1535 ntBASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 NSUN5P2-203ENST00000457352 1529 ntBASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 SUSD4-208ENST00000494793 1833 ntTSL 5 BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 FAM220CP-201ENST00000395253 831 ntBASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 AL139327.4-201ENST00000612362 153 ntBASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
NHLRC1Q6VVB1 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
NHLRC1Q6VVB1 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms