Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 AC079328.2-201ENST00000561241 3354 ntBASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 AC092368.3-202ENST00000574180 1591 ntBASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 WWC2-201ENST00000403733 8826 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 TSPY6P-201ENST00000448518 926 ntBASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 ABHD17AP6-201ENST00000458502 1044 ntBASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 RPS2P52-201ENST00000469610 820 ntBASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 AC091874.3-201ENST00000512672 1195 ntBASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 BET1L-207ENST00000529614 560 ntTSL 5 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 GXYLT1P5-201ENST00000614548 1189 ntBASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 GPAT2P1-201ENST00000444924 1672 ntBASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 PAUPAR-201ENST00000630360 2965 ntBASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
KCNIP4Q6PIL6 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 LYSMD4-203ENST00000378904 2122 ntBASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 RHEB-204ENST00000472642 900 ntTSL 3 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 LINC01451-201ENST00000623792 534 ntBASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 AC016396.2-201ENST00000562575 1417 ntBASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 RALGAPA1-201ENST00000307138 7911 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 AC104640.1-201ENST00000562617 2109 ntBASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
KCNIP4Q6PIL6 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms