Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CNKSR3Q6P9H4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 COPE-202ENST00000349893 948 ntTSL 2 BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 RBPMS2P1-201ENST00000437762 623 ntBASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 TERF1P3-201ENST00000505638 1227 ntBASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 MMP17-203ENST00000535004 719 ntTSL 3 BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 AC087641.1-201ENST00000557561 1021 ntBASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 REXO1L11P-201ENST00000620964 1927 ntBASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
CNKSR3Q6P9H4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 AC236430.1-201ENST00000402231 743 ntBASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 AC107890.1-201ENST00000422478 521 ntBASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 SPCS2P4-201ENST00000436160 681 ntBASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 INO80E-210ENST00000567705 880 ntTSL 3 BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.59■□□□□ 0.57
CNKSR3Q6P9H4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CNKSR3Q6P9H4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNKSR3Q6P9H4 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNKSR3Q6P9H4 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.58■□□□□ 0.57
CNKSR3Q6P9H4 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
CNKSR3Q6P9H4 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
CNKSR3Q6P9H4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.57
CNKSR3Q6P9H4 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 CENPM-205ENST00000404067 905 ntTSL 3 BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 AC005034.1-201ENST00000426657 489 ntBASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 AC002472.2-201ENST00000442739 958 ntBASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 OARD1-208ENST00000469104 704 ntTSL 2 BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 AC125807.1-201ENST00000483097 614 ntBASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 IGHV3-62-201ENST00000520057 340 ntBASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 AL035252.4-201ENST00000624174 288 ntBASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 USP49-202ENST00000373010 2446 ntTSL 5 BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CNKSR3Q6P9H4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.57■□□□□ 0.56
CNKSR3Q6P9H4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNKSR3Q6P9H4 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNKSR3Q6P9H4 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CNKSR3Q6P9H4 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CNKSR3Q6P9H4 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CNKSR3Q6P9H4 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.57■□□□□ 0.56
CNKSR3Q6P9H4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms